FFCP PHASE1:Hg19::chr11:6413297..6413309,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6609 | |EntrezGene=6609 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11120 | |HGNC=11120 | ||
|TSSclassifier=strong | |||
|UniProt=P17405 | |UniProt=P17405 | ||
|association_with_transcript=190bp_to_X52679_5end | |association_with_transcript=190bp_to_X52679_5end | ||
|cluster_id=chr11:6413297..6413309,+ | |||
|description=CAGE_peak_7_at_SMPD1_5end | |description=CAGE_peak_7_at_SMPD1_5end | ||
|id=chr11:6413297..6413309,+ | |id=chr11:6413297..6413309,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.26e-12!180;CL:0000057!4.42e-07!75;CL:0002334!7.39e-07!12 | |ontology_enrichment_celltype=CL:0000055!1.26e-12!180;CL:0000057!4.42e-07!75;CL:0002334!7.39e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002581;1.05e-08;1!CL:0002591;1.05e-08;1!CL:1000306;2.67e-08;4!CL:0002547;2.67e-08;4!CL:0002595;8.40e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,5.70e-09,1;CL:0002591,1.22e-08,1;CL:1000306,2.31e-08,4;CL:0002547,2.31e-08,4;CL:0002595,6.85e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.05e-08;1!UBERON:0006242;1.05e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;8.87e-11;3!DOID:127;8.87e-11;3!DOID:0060072;2.67e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.90e-11,3;DOID:127,8.90e-11,3;DOID:0060072,2.68e-08,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.05e-08;1!UBERON:0002082;1.05e-08;1!UBERON:0004797;2.67e-08;4!UBERON:0000415;2.67e-08;4!UBERON:0007240;2.67e-08;4!UBERON:0005742;2.67e-08;4!UBERON:0005734;2.67e-08;4!UBERON:0004664;2.67e-08;4!UBERON:0004663;2.67e-08;4!UBERON:0003834;8.40e-07;5!UBERON:0001533;8.40e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,7.18e-09,1;UBERON:0002082,7.18e-09,1;UBERON:0010226,7.18e-09,1;UBERON:0000415,2.31e-08,4;UBERON:0007240,2.31e-08,4;UBERON:0005742,2.31e-08,4;UBERON:0005734,2.31e-08,4;UBERON:0004664,2.31e-08,4;UBERON:0004663,2.31e-08,4;UBERON:0003834,6.85e-07,5;UBERON:0001533,6.85e-07,5 | |||
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| ||
|short_description=p7@SMPD1 | |short_description=p7@SMPD1 | ||
}} | }} |
Latest revision as of 03:24, 19 September 2015
Short description: | p7@SMPD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SMPD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 190bp_to_X52679_5end |
EntrezGene: | SMPD1 |
HGNC: | 11120 |
UniProt: | P17405 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 5.70e-09 | 1 |
smooth muscle cell of the pulmonary artery | 1.22e-08 | 1 |
fibroblast of tunica adventitia of artery | 2.31e-08 | 4 |
fibroblast of the aortic adventitia | 2.31e-08 | 4 |
smooth muscle cell of the subclavian artery | 6.85e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 7.18e-09 | 1 |
cardiac ventricle | 7.18e-09 | 1 |
future cardiac ventricle | 7.18e-09 | 1 |
artery wall | 2.31e-08 | 4 |
tunica adventitia of artery | 2.31e-08 | 4 |
adventitia | 2.31e-08 | 4 |
tunica adventitia of blood vessel | 2.31e-08 | 4 |
aorta tunica adventitia | 2.31e-08 | 4 |
aorta wall | 2.31e-08 | 4 |
thoracic segment blood vessel | 6.85e-07 | 5 |
subclavian artery | 6.85e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.90e-11 | 3 |
leiomyoma | 8.90e-11 | 3 |
benign neoplasm | 2.68e-08 | 4 |