FFCP PHASE1:Hg19::chr19:49140255..49140268,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:49140255..49140268,- to FFCP PHASE1:Hg19::chr19:49140255..49140268,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1628 | |EntrezGene=1628 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2697 | |HGNC=2697 | ||
|TSSclassifier=strong | |||
|UniProt=Q10586,Q59HF2 | |UniProt=Q10586,Q59HF2 | ||
|association_with_transcript=370bp_to_ENST00000222122,NM_001352,uc002pjx.3,uc002pjy.2,uc010elz.1_5end | |||
|cluster_id=chr19:49140255..49140268,- | |||
|description=CAGE_peak_9_at_DBP_5end | |||
|id=chr19:49140255..49140268,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002586;3.56e-40;3!CL:0000149;2.45e-30;4!CL:0000235;8.46e-10;6!CL:0000147;4.01e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,9.96e-41,3;CL:0000149,9.47e-31,4;CL:0000235,1.10e-09,6;CL:0000147,3.08e-09,14 | |||
|ontology_enrichment_development_v019=UBERON:0007123;9.50e-12;5!UBERON:0008814;5.94e-08;2!UBERON:0010056;5.94e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.18e-21!115;UBERON:0000062!4.27e-11!511;UBERON:0003075!1.72e-08!86;UBERON:0007284!1.72e-08!86;UBERON:0002346!4.89e-08!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.81e-42;5!UBERON:0005388;1.81e-42;5!UBERON:0001802;1.81e-42;5!UBERON:0001781;3.56e-40;3!UBERON:0001782;3.56e-40;3!UBERON:0002171;1.31e-14;1!UBERON:0006518;1.31e-14;1!UBERON:0008949;1.31e-14;1!UBERON:0000101;1.31e-14;1!UBERON:0002167;1.31e-14;1!UBERON:0000020;2.18e-14;23!UBERON:0001032;8.67e-14;24!UBERON:0004456;8.67e-14;24!UBERON:0002046;9.50e-12;5!UBERON:0007625;1.85e-11;11!UBERON:0000019;1.91e-11;19!UBERON:0000047;1.91e-11;19!UBERON:0004088;1.91e-11;19!UBERON:0010230;1.91e-11;19!UBERON:0000970;6.91e-11;20!UBERON:0002104;2.22e-10;21!UBERON:0001456;2.22e-10;21!UBERON:0000341;5.94e-08;2!UBERON:0001876;5.94e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,9.96e-41,3;UBERON:0005424,9.96e-41,3;UBERON:0000966,8.78e-36,6;UBERON:0005388,8.78e-36,6;UBERON:0001802,8.78e-36,6;UBERON:0001781,9.47e-31,4;UBERON:0002171,1.23e-14,1;UBERON:0006518,1.23e-14,1;UBERON:0008949,1.23e-14,1;UBERON:0000101,1.23e-14,1;UBERON:0002167,1.23e-14,1;UBERON:0000020,7.90e-14,24;UBERON:0001032,7.90e-14,24;UBERON:0004456,7.90e-14,24;UBERON:0002046,7.47e-12,5;UBERON:0004117,7.47e-12,5;UBERON:0007689,7.47e-12,5;UBERON:0007123,7.47e-12,5;UBERON:0003091,7.47e-12,5;UBERON:0007625,1.32e-11,11;UBERON:0000019,5.62e-11,20;UBERON:0000047,5.62e-11,20;UBERON:0010312,5.62e-11,20;UBERON:0004088,5.62e-11,20;UBERON:0010230,5.62e-11,20;UBERON:0003072,5.62e-11,20;UBERON:0004128,5.62e-11,20;UBERON:0003071,5.62e-11,20;UBERON:0000970,1.82e-10,21;UBERON:0002104,1.82e-10,21;UBERON:0001456,5.31e-10,22;UBERON:0001876,3.82e-08,2;UBERON:0000341,7.03e-08,2;UBERON:0000153,2.14e-07,62;UBERON:0007811,2.14e-07,62;UBERON:0008814,2.79e-07,18;UBERON:0005085,3.71e-07,31;UBERON:0001444,9.66e-07,49 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0.309632246632152,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0.344745680736619,0,1.35426486594342,0,0,0,0,0.320929027076094,0.639337125799041,0.329851300186716,0.199463657621632,0,0,1.13477044938228,0.622822248995575,0,0,0.217188844705117,0,0,0.316462387440884,0.633765858935825,0.212604299965044,0,0.112328631146495,0.300353785683013,0.16072558669708,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.327447688744282,0.728590576585084,0.370784442784429,0,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0.243947412259191,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.220587945464788,0.435758888184812,0.474541238222193,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0.277765335475589,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0.702012795417713,0,0,0,0,0.0895585227028483,0,0,0,0.176096868026452,0,0.576479813667846,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.241718899183244,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79515087581472,1.31205858279882,1.30151357865721,0.515205058238611,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0.411362273086194,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0.313359791546046,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0.242721043499027,0.111443384277478,0,0,0.296964680832639,0.307160702099232,1.9882952955326,0.281338832821026,0.333926115068718,0,0,0.796991953004279,0,0.251932747854276,0,0,0,0,0,0,0.394573622547734,0,0,0,0.556608588971108,0,0,0.787139999965761,0,0.227586896570999,0.508507300585533,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0.591095237907095,0.438770794307945,0.10893846351899,0.557694977114413,0.230850775511391,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.530745387020035,0,0,0,0.104421949505455,0.539209063845416,0,0.234264445725339,0,0.782658475728359,0.485560759068186,0.789168805698781,0,0,0.379119477770928,0,0.103688191397247,0,0,0,0,0.284609546029793,0.277349346026277,0.347119476670262,0.783939179315021,0,0.52418000472609,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0.193978032976839,0,0.451961481561065,0,0,0.316553979779393,0.586654148204409,0.160317640503067,0,0.39961921916426,0,0.229073192331831,0,0,0.124252535565433,0.235694034616795,0,0.104602846312333,0.101998217636322,0,0,0.273810757783986,0,0,0,0.279282401272254,0.687481272035051,0,0,0.429226048136571,0.89268582976749,0.335917362433631,0,0,0.0787831823072236,0,0,0.295282444544246,0.254019996197353,0,0.272406812223151,0,0,0,0.449947783103001,0.77380195455795,0.303747783290123,0,0.315222829196793,0.209818352539992,0.422401346077626,0.179287339332845,0,0,0,0,0.542999601753713,0,0,0,0.164185041498678,0,0,0.879313402068495,0,0.258565912723101,0,0,0.704815022316672,0.213574825135389,0.314408610199332,1.24271716604159,0,0,0,0.638341257770182,0.544017803369474,0.2506898940227,0.919036730290385,0.983617892129413,0.628216385000937,0,0.244052529803926,0,0,0.554645257684261,0.869349641179368,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0.686520205190771,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0,0.336749488765919,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0.926404341482917,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0.622077260032973,0,0.107824811396682,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0.513833800771676,0,0.159633859057151,0.41023272848151,0,0.622415272177961,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0.526472298444801,0,0,0,0,0,0.607838261565552,0,0,0.380494861163441,0,0.548257766857182,0.992422356778588,0.175871244359621,0.511049710558381,0.535701835878287,0,0,0,0,0.115233987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| ||
|short_description=p9@DBP | |||
}} | }} |
Latest revision as of 03:26, 19 September 2015
Short description: | p9@DBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_DBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 370bp_to_ENST00000222122, NM_001352, uc002pjx.3, uc002pjy.2, uc010elz.1_5end |
EntrezGene: | DBP |
HGNC: | 2697 |
UniProt: | Q10586Q59HF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 9.96e-41 | 3 |
visual pigment cell | 9.47e-31 | 4 |
macrophage | 1.10e-09 | 6 |
pigment cell | 3.08e-09 | 14 |