FFCP PHASE1:Hg19::chr6:47254229..47254244,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27242 | |EntrezGene=27242 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13469 | |HGNC=13469 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_AJ420531_5end | |association_with_transcript=-8bp_to_AJ420531_5end | ||
|cluster_id=chr6:47254229..47254244,- | |||
|description=CAGE_peak_6_at_TNFRSF21_5end | |description=CAGE_peak_6_at_TNFRSF21_5end | ||
|id=chr6:47254229..47254244,- | |id=chr6:47254229..47254244,- | ||
|ontology_enrichment_celltype=CL:0000066!4.69e-10!254;CL:0002076!7.31e-08!43;CL:0000223!2.14e-07!59 | |ontology_enrichment_celltype=CL:0000066!4.69e-10!254;CL:0002076!7.31e-08!43;CL:0000223!2.14e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002178;7.17e-14;3!CL:0000307;1.40e-13;3!CL:0002076;1.77e-11;42!CL:0002336;8.20e-11;1!CL:0002261;8.20e-11;1!CL:0002170;8.20e-11;1!CL:0002379;8.20e-11;1!CL:0000244;2.05e-10;4!CL:0000731;2.05e-10;4!CL:0002251;7.33e-08;20!CL:0002149;3.15e-07;6!CL:0002255;3.15e-07;6 | |ontology_enrichment_celltype_v019=CL:0002178;7.17e-14;3!CL:0000307;1.40e-13;3!CL:0002076;1.77e-11;42!CL:0002336;8.20e-11;1!CL:0002261;8.20e-11;1!CL:0002170;8.20e-11;1!CL:0002379;8.20e-11;1!CL:0000244;2.05e-10;4!CL:0000731;2.05e-10;4!CL:0002251;7.33e-08;20!CL:0002149;3.15e-07;6!CL:0002255;3.15e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.97e-17,42;CL:0002178,8.44e-14,3;CL:0000068,1.93e-13,3;CL:0000069,1.93e-13,3;CL:0000307,1.93e-13,3;CL:0000377,1.93e-13,3;CL:0000223,5.32e-12,58;CL:0002336,9.05e-11,1;CL:0002261,9.05e-11,1;CL:0002170,9.05e-11,1;CL:0002379,1.10e-10,1;CL:0000244,1.62e-10,4;CL:0000731,1.62e-10,4;CL:0002251,7.01e-08,20;CL:0002149,2.69e-07,6;CL:0002255,2.69e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000377;1.40e-13;3!CL:0000223;2.84e-09;58 | |ontology_enrichment_development_v019=CL:0000377;1.40e-13;3!CL:0000223;2.84e-09;58 | ||
|ontology_enrichment_disease=DOID:305!4.75e-07!106 | |ontology_enrichment_disease=DOID:305!4.75e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:3620;8.20e-11;1!DOID:3565;8.20e-11;1!DOID:3001;3.15e-07;6 | |ontology_enrichment_disease_v019=DOID:3620;8.20e-11;1!DOID:3565;8.20e-11;1!DOID:3001;3.15e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3620,1.10e-10,1;DOID:3565,1.10e-10,1;DOID:3001,2.69e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000468!1.20e-08!659;UBERON:0004119!1.83e-07!169;UBERON:0000925!1.83e-07!169;UBERON:0006595!1.83e-07!169 | |ontology_enrichment_uberon=UBERON:0000468!1.20e-08!659;UBERON:0004119!1.83e-07!169;UBERON:0000925!1.83e-07!169;UBERON:0006595!1.83e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.11e-08;5!UBERON:0010039;1.11e-08;5!UBERON:0000365;1.66e-08;5!UBERON:0005910;3.15e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000945;1.11e-08;5!UBERON:0010039;1.11e-08;5!UBERON:0000365;1.66e-08;5!UBERON:0005910;3.15e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.37e-08,5;UBERON:0005910,2.69e-07,6 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0.527533956456907,0,0,2.01697543935533,1.20538905604795,0,0.487932798790507,0.246242116153576,0,0,0,0,0,0.152826811495903,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.464858073811369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0,0.370784442784429,0.324547393654683,0,0.132957960518865,0.476981248610684,0.571994910780128,0,0.596287222100115,0,0,0.56530794192401,0,0.550236083880135,0.208994966536811,0.258416759169329,0.35576626268671,0,0.805658634218294,0.760272105718513,2.19655851793353,0,0.81014194788176,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0.622422070799533,0.134710672069688,0,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,0,0.213557388818567,0.211931901159562,0.300091096084402,0.309157587715317,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.504641701751257,0,0,1.92972281457866,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0.245976877086227,0,0.658501712451753,0,0,1.29623823221941,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0.671928512795438,0.283550194484773,0.358234090811393,0.290633938513962,0.766765358330422,0,0.088048434013226,0,0.576479813667846,0.12624243342638,0,0,0,0,0,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0.823240336780769,0,0.355391948742546,0,0.904318131178758,0,1.99945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.841980283299221,0.512556597022804,0,0,0,0.462629081407967,0,0,2.07701771673448,0,0.241718899183244,0.601519410909855,1.10497186723076,0.114814448164607,0.364182336013434,0,0,0.385076685522074,0,0,0.422206515571503,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.366277859273374,0,0,0,0,0,0.308097234229289,0.307007349452259,0,0.107420244868274,0.145016693914229,0,0.178064071293475,0.165284915360978,0.192190067365106,0.127612712494584,0.4046311234222,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0,0.274537029736055,0.353437207037059,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0.66343897524122,0.876901770507525,0.578775534266688,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,1.34060455107157,1.08890984861323,0,0.86101074534246,1.68471475667626,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0.284567373393656,0,0,0,0,0,0,0,0.313359791546046,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0.614321404198464,0,0,0.333926115068718,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0.808815160325942,0.179021174675609,0,0.0986434056369336,0,0,0,0.463840490809256,0,0,0,0,0.455173793141999,0.508507300585533,0,0,0,0,0,0,0,0.221158519862449,0,0.438770794307945,0.10893846351899,0.139423744278603,0,0.227884111694002,0.23056390438806,0.0897576444097721,0,0.638002319463839,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0.103688191397247,0.664653872707185,0,0.313932918407225,0,1.42304773014896,0.138674673013139,0.867798691675654,0.489961987071888,0,0,0,0,0.0730893170861856,0.164230914106418,0.193978032976839,0,0.225980740780532,0,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,2.39771531498556,1.15272333723285,0,0,0.288109595976299,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0.472699093843342,0.412079291905832,0.337017719270924,0.590564889088493,0.0846733320657845,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.157363764404994,0.211200673038813,0,0.191915197319445,0,0,0,1.08599920350743,0,0.653174720218818,0,0,0,0.113312091520126,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0.306345576763462,0,0.157054096250234,0,0.854183854313742,0.1251909307065,0,0.110929051536852,0.620964029413834,0.138348634936231,0,0,0,1.17632909849086,0,0,0.149254802886874,0,0.55480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| ||
|short_description=p6@TNFRSF21 | |short_description=p6@TNFRSF21 | ||
}} | }} |
Latest revision as of 03:52, 19 September 2015
Short description: | p6@TNFRSF21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TNFRSF21_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_AJ420531_5end |
EntrezGene: | TNFRSF21 |
HGNC: | 13469 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.97e-17 | 42 |
epithelial cell of stomach | 8.44e-14 | 3 |
duct epithelial cell | 1.93e-13 | 3 |
branched duct epithelial cell | 1.93e-13 | 3 |
tracheal epithelial cell | 1.93e-13 | 3 |
tracheoblast | 1.93e-13 | 3 |
endodermal cell | 5.32e-12 | 58 |
buccal mucosa cell | 9.05e-11 | 1 |
endothelial cell of viscerocranial mucosa | 9.05e-11 | 1 |
keratinized cell of the oral mucosa | 9.05e-11 | 1 |
meningothelial cell | 1.10e-10 | 1 |
transitional epithelial cell | 1.62e-10 | 4 |
urothelial cell | 1.62e-10 | 4 |
epithelial cell of alimentary canal | 7.01e-08 | 20 |
epithelial cell of uterus | 2.69e-07 | 6 |
stromal cell of endometrium | 2.69e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.37e-08 | 5 |
transitional epithelium | 2.69e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.10e-10 | 1 |
meningioma | 1.10e-10 | 1 |
female reproductive endometrioid cancer | 2.69e-07 | 6 |