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FFCP PHASE1:Hg19::chr17:26127550..26127556,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=4843
|EntrezGene=4843
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=7873
|HGNC=7873
|TSSclassifier=strong
|UniProt=F8WEM3,P35228
|UniProt=F8WEM3,P35228
|association_with_transcript=0bp_to_ENST00000302153,ENST00000379105,NM_000625,uc002gzu.2,uc010wab.1_5end
|association_with_transcript=0bp_to_ENST00000302153,ENST00000379105,NM_000625,uc002gzu.2,uc010wab.1_5end
|cluster_id=chr17:26127550..26127556,-
|coexpression_cluster_id=C243
|coexpression_cluster_id=C243
|description=CAGE_peak_1_at_NOS2_5end
|description=CAGE_peak_1_at_NOS2_5end
|id=chr17:26127550..26127556,-
|id=chr17:26127550..26127556,-
|ontology_enrichment_celltype=CL:0000138;3.74e-12;6!CL:1000415;1.57e-09;2!CL:0000153;2.09e-08;9!CL:0000447;2.09e-08;9!CL:0002178;7.92e-07;3
|ontology_enrichment_celltype=CL:1001319!8.98e-07!1;CL:1000600!8.98e-07!1
|ontology_enrichment_development=UBERON:0001045;3.75e-18;1!UBERON:0006965;1.86e-09;2
|ontology_enrichment_celltype_v019=CL:0000138;3.74e-12;6!CL:1000415;1.57e-09;2!CL:0000153;2.09e-08;9!CL:0000447;2.09e-08;9!CL:0002178;7.92e-07;3
|ontology_enrichment_disease=DOID:3910;1.86e-09;2
|ontology_enrichment_celltype_v019_2=CL:0000058,3.44e-12,6;CL:0000138,3.44e-12,6;CL:1000415,1.57e-09,2;CL:0000153,1.97e-08,9;CL:0000447,1.97e-08,9;CL:0002178,8.15e-07,3
|ontology_enrichment_uberon=UBERON:0001154;3.75e-18;1!UBERON:0001153;3.75e-18;1!UBERON:0009854;3.75e-18;1!UBERON:0005409;3.88e-18;22!UBERON:0009856;1.71e-17;4!UBERON:0000160;3.81e-15;17!UBERON:0004907;2.11e-14;5!UBERON:0000059;2.63e-14;11!UBERON:0004921;5.99e-11;33!UBERON:0003127;8.69e-10;2!UBERON:0000341;1.86e-09;2!UBERON:0004903;1.86e-09;2!UBERON:0002173;1.86e-09;2!UBERON:0002186;1.86e-09;2!UBERON:0001155;2.25e-08;9!UBERON:0002110;9.12e-07;3
|ontology_enrichment_development_v019=UBERON:0001045;3.75e-18;1!UBERON:0006965;1.86e-09;2
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:3910;1.86e-09;2
|ontology_enrichment_disease_v019_2=DOID:3910,1.86e-09,2
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|ontology_enrichment_uberon_v019=UBERON:0001154;3.75e-18;1!UBERON:0001153;3.75e-18;1!UBERON:0009854;3.75e-18;1!UBERON:0005409;3.88e-18;22!UBERON:0009856;1.71e-17;4!UBERON:0000160;3.81e-15;17!UBERON:0004907;2.11e-14;5!UBERON:0000059;2.63e-14;11!UBERON:0004921;5.99e-11;33!UBERON:0003127;8.69e-10;2!UBERON:0000341;1.86e-09;2!UBERON:0004903;1.86e-09;2!UBERON:0002173;1.86e-09;2!UBERON:0002186;1.86e-09;2!UBERON:0001155;2.25e-08;9!UBERON:0002110;9.12e-07;3
|ontology_enrichment_uberon_v019_2=UBERON:0001154,3.75e-18,1;UBERON:0001153,3.75e-18,1;UBERON:0001045,3.75e-18,1;UBERON:0005409,4.87e-16,25;UBERON:0000160,3.95e-15,17;UBERON:0004907,2.11e-14,5;UBERON:0000059,2.82e-14,11;UBERON:0003127,8.69e-10,2;UBERON:0004903,1.86e-09,2;UBERON:0002173,1.86e-09,2;UBERON:0002186,1.86e-09,2;UBERON:0000341,2.02e-09,2;UBERON:0001155,2.37e-08,9;UBERON:0002110,9.12e-07,3;UBERON:0006242,9.12e-07,3
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|short_description=p1@NOS2
|short_description=p1@NOS2
}}
}}

Latest revision as of 04:15, 19 September 2015

Short description:p1@NOS2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_NOS2_5end
Coexpression cluster:C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing
Association with transcript: 0bp_to_ENST00000302153, ENST00000379105, NM_000625, uc002gzu.2, uc010wab.1_5end
EntrezGene:NOS2
HGNC: 7873
UniProt: F8WEM3P35228
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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