FFCP PHASE1:Hg19::chr12:54366975..54367001,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3227 | |EntrezGene=3227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5123 | |HGNC=5123 | ||
|TSSclassifier=strong | |||
|UniProt=O43248 | |UniProt=O43248 | ||
|association_with_transcript=63bp_to_ENST00000243082_5end | |association_with_transcript=63bp_to_ENST00000243082_5end | ||
|cluster_id=chr12:54366975..54367001,+ | |||
|coexpression_cluster_id=C1676 | |coexpression_cluster_id=C1676 | ||
|description=CAGE_peak_1_at_HOXC11_5end | |description=CAGE_peak_1_at_HOXC11_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002594!2.53e-07!4;CL:0000188!4.12e-07!9 | |ontology_enrichment_celltype=CL:0002594!2.53e-07!4;CL:0000188!4.12e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002594;4.32e-13;4 | |ontology_enrichment_celltype_v019=CL:0002594;4.32e-13;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002594,4.97e-13,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!2.62e-11!143;DOID:305!6.34e-07!106 | |ontology_enrichment_disease=DOID:0050687!2.62e-11!143;DOID:305!6.34e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:171;8.72e-08;10 | |ontology_enrichment_disease_v019=DOID:171;8.72e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.78e-16,143;DOID:305,9.91e-10,106;DOID:162,1.30e-08,235;DOID:14566,2.98e-08,239;DOID:171,9.32e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.19e-12!9;UBERON:0001310!2.53e-07!4;UBERON:0001557!4.17e-07!19;UBERON:0004905!4.94e-07!5;UBERON:0000982!4.94e-07!5;UBERON:0004770!4.94e-07!5 | |ontology_enrichment_uberon=UBERON:0001737!1.19e-12!9;UBERON:0001310!2.53e-07!4;UBERON:0001557!4.17e-07!19;UBERON:0004905!4.94e-07!5;UBERON:0000982!4.94e-07!5;UBERON:0004770!4.94e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.68e-19;9!UBERON:0001557;7.68e-19;9!UBERON:0002346;4.13e-13;4!UBERON:0000923;4.13e-13;4!UBERON:0010316;4.13e-13;4!UBERON:0005291;4.13e-13;4!UBERON:0001310;4.32e-13;4!UBERON:0010260;1.55e-11;9!UBERON:0002050;1.76e-10;5!UBERON:0005423;1.76e-10;5 | |ontology_enrichment_uberon_v019=UBERON:0001737;7.68e-19;9!UBERON:0001557;7.68e-19;9!UBERON:0002346;4.13e-13;4!UBERON:0000923;4.13e-13;4!UBERON:0010316;4.13e-13;4!UBERON:0005291;4.13e-13;4!UBERON:0001310;4.32e-13;4!UBERON:0010260;1.55e-11;9!UBERON:0002050;1.76e-10;5!UBERON:0005423;1.76e-10;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.42e-19,9;UBERON:0001310,4.97e-13,4;UBERON:0010260,1.57e-11,9;UBERON:0001557,1.82e-10,19 | |||
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| ||
|short_description=p1@HOXC11 | |short_description=p1@HOXC11 | ||
}} | }} |
Latest revision as of 04:18, 19 September 2015
Short description: | p1@HOXC11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HOXC11_5end |
Coexpression cluster: | C1676_neuroectodermal_synovial_breast_anaplastic_epitheloid_rhabdomyosarcoma_neuroepithelioma |
Association with transcript: | 63bp_to_ENST00000243082_5end |
EntrezGene: | HOXC11 |
HGNC: | 5123 |
UniProt: | O43248 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 4.97e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.42e-19 | 9 |
umbilical artery | 4.97e-13 | 4 |
umbilical blood vessel | 1.57e-11 | 9 |
upper respiratory tract | 1.82e-10 | 19 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.78e-16 | 143 |
carcinoma | 9.91e-10 | 106 |
cancer | 1.30e-08 | 235 |
disease of cellular proliferation | 2.98e-08 | 239 |
neuroectodermal tumor | 9.32e-08 | 10 |