FFCP PHASE1:Hg19::chr12:54379569..54379583,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3222 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5127 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-45bp_to_ENST00000513209_5end | |||
|cluster_id=chr12:54379569..54379583,+ | |||
|description=CAGE_peak_9_at_HOXC5_5end | |||
|id=chr12:54379569..54379583,+ | |||
|ontology_enrichment_celltype=CL:0000035!1.08e-10!20;CL:0000062!1.09e-09!11;CL:0000375!1.09e-09!11;CL:0000335!1.09e-09!11 | |||
|ontology_enrichment_celltype_v019=CL:0002178;8.50e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,7.15e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.71e-10;29 | |||
|ontology_enrichment_disease=DOID:0050687!1.03e-16!143;DOID:305!3.16e-09!106;DOID:14566!7.51e-09!239;DOID:162!1.98e-08!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.09e-12,106;DOID:0050687,2.62e-11,143;DOID:162,3.89e-07,235;DOID:14566,6.62e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.20e-14!9;UBERON:0001557!8.58e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.36e-35;9!UBERON:0001557;5.36e-35;9!UBERON:0000945;2.31e-12;5!UBERON:0010039;2.31e-12;5!UBERON:0000065;2.19e-07;44!UBERON:0003343;2.66e-07;4!UBERON:0004785;2.66e-07;4!UBERON:0000072;3.54e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.43e-35,9;UBERON:0001557,3.01e-16,19;UBERON:0000945,5.91e-08,8;UBERON:0010039,5.91e-08,8;UBERON:0008947,1.08e-07,38;UBERON:0003258,1.08e-07,38;UBERON:0003343,2.27e-07,4;UBERON:0004785,2.27e-07,4;UBERON:0001041,3.44e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,1.5905718941022,0.486634870302636,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.352303495931295,0.323745888736263,0.140450806702248,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0.257640540045629,0.558350568994769,0.168776332241266,0.487185025805993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77460200059766,1.18009283054671,2.6511213287183,2.31617342738027,2.17879444092406,2.37270619111097,0.808987848960987,1.56977172100277,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0.763976851116555,0,0,0.205654985406647,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0,0,0.771622122786426,0,0.266422179016099,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0,0,0,0,0,2.27407504055985,1.03473071292505,0.664225598535437,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.308419387605311,0.177561725313127,0.246381468041427,0,0.116210378459959,0,0,0,0,0,0,0.451199612907412,0.15403067420883,0,1.46139224653261,0.316654886678627,0,0,0.215915916102139,0,1.08378575017541,0,0,0,0.447749509444357,0,0,0,0,0,0,0.457847324091717,0.247528499761764,0.574265537996172,1.95018073810956,0,0.096670718292122,0,0,0,0.107420244868274,0.435050081742686,0.340906509664404,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.811641507850816,0.30982349809975,0,0.143411352204052,0.294747123039363,1.07001315444375,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0.242721043499027,0,0,0,0,0,0,0,0,0,0.844501632511974,0.19924798825107,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349839999984783,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.544692317594951,1.53366118706464,0,0,0,0.0897576444097721,0.434589487688032,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,0.17472666824203,0,2.12863928835987,1.97341156132701,1.47807822695777,0,0.529536760149002,0,0.274083849293502,0.397429223405979,0,0.195551382734803,0,0,0,3.02589876023623,1.4889757501569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,2.55911451938347,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.577000469484979,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0.235265819698172,0,0.28984205722165,0.149254802886874,0,0,1.13641803165053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0.845248493434508,0,0,0,0,0,0,0,0,0,0.314531883711793,0.327628914576042,0.169732529954025,0.637724760305049,0.991486114072017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96295437002051,1.1796972334774,0,0.231051332300676,0.381382095467167,0.690359926060101,0.596748666348824,0.300841313397029,0.40341013740704,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0.703484977438482,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0,0.118193840883968,0,0,0,0.840816489941367,0,0.215927591218621,0.47775168788705,0,0,0.929931402945002,1.73858272302579,0,0,0,0,0,0.236664001461131,0.340853619036631,0,0,0,0,0,1.57040373784389,0,0,0.102662806856247,1.1598144313382,0,0.233939463462106,0,0,0,0.109940516745429,0,0,0,0,0,0.707029641304878,0,0,0.4226557275834,0.509781344063451,0,0,0,0.178553938605658,0,0,0,0,0,4.1020606170228,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p9@HOXC5 | |||
}} |
Latest revision as of 04:34, 19 September 2015
Short description: | p9@HOXC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HOXC5_5end |
Coexpression cluster: | NA |
Association with transcript: | -45bp_to_ENST00000513209_5end |
EntrezGene: | HOXC5 |
HGNC: | 5127 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 7.15e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.43e-35 | 9 |
upper respiratory tract | 3.01e-16 | 19 |
stomach | 5.91e-08 | 8 |
food storage organ | 5.91e-08 | 8 |
respiratory primordium | 1.08e-07 | 38 |
endoderm of foregut | 1.08e-07 | 38 |
mucosa of oral region | 2.27e-07 | 4 |
respiratory system mucosa | 2.27e-07 | 4 |
foregut | 3.44e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.09e-12 | 106 |
cell type cancer | 2.62e-11 | 143 |
cancer | 3.89e-07 | 235 |
disease of cellular proliferation | 6.62e-07 | 239 |