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FFCP PHASE1:Hg19::chr1:72566627..72566642,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=257194
|EntrezGene=257194
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=17302
|HGNC=17302
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-13bp_to_uc001dfv.2_5end
|association_with_transcript=-13bp_to_uc001dfv.2_5end
|cluster_id=chr1:72566627..72566642,-
|coexpression_cluster_id=C242
|description=CAGE_peak_10_at_NEGR1_5end
|description=CAGE_peak_10_at_NEGR1_5end
|id=chr1:72566627..72566642,-
|id=chr1:72566627..72566642,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:225!2.10e-23!1;DOID:74!2.07e-12!2;DOID:1287!7.70e-07!4
|ontology_enrichment_disease_v019=DOID:1036;1.07e-13;8!DOID:1240;1.83e-13;39!DOID:8692;1.83e-13;31
|ontology_enrichment_disease_v019_2=DOID:8692,5.04e-14,31;DOID:1036,1.07e-13,8;DOID:1240,2.03e-11,39;DOID:2531,4.95e-09,51;DOID:0060083,4.95e-09,51
|ontology_enrichment_uberon=UBERON:0000988!5.61e-30!3;UBERON:0002148!2.32e-12!2;UBERON:0009662!2.32e-12!2;UBERON:0002298!6.51e-12!8;UBERON:0002680!1.07e-10!9;UBERON:0001895!1.07e-10!9;UBERON:0010092!1.07e-10!9;UBERON:0006331!1.12e-08!3;UBERON:0002771!1.30e-08!3;UBERON:0004733!2.96e-08!12;UBERON:0002028!2.96e-08!12;UBERON:0007277!2.96e-08!12;UBERON:0004732!1.09e-07!13;UBERON:0003076!8.83e-07!15;UBERON:0003057!8.83e-07!15
|ontology_enrichment_uberon=UBERON:0000988!5.61e-30!3;UBERON:0002148!2.32e-12!2;UBERON:0009662!2.32e-12!2;UBERON:0002298!6.51e-12!8;UBERON:0002680!1.07e-10!9;UBERON:0001895!1.07e-10!9;UBERON:0010092!1.07e-10!9;UBERON:0006331!1.12e-08!3;UBERON:0002771!1.30e-08!3;UBERON:0004733!2.96e-08!12;UBERON:0002028!2.96e-08!12;UBERON:0007277!2.96e-08!12;UBERON:0004732!1.09e-07!13;UBERON:0003076!8.83e-07!15;UBERON:0003057!8.83e-07!15
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.7669462630742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09886179476517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p10@NEGR1
|short_description=p10@NEGR1
}}
}}

Latest revision as of 04:34, 19 September 2015

Short description:p10@NEGR1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_10_at_NEGR1_5end
Coexpression cluster:C242_acute_Chondrocyte_myelodysplastic_granulocyte_biphenotypic_Fibroblast_stomach
Association with transcript: -13bp_to_uc001dfv.2_5end
EntrezGene:NEGR1
HGNC: 17302
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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