FFCP PHASE1:Hg19::chr22:20877924..20877934,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51586 | |EntrezGene=51586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14248 | |HGNC=14248 | ||
|TSSclassifier=strong | |||
|UniProt=C9JGN2,B4DGD6 | |UniProt=C9JGN2,B4DGD6 | ||
|association_with_transcript=0bp_to_ENST00000445189,ENST00000542312,uc011aht.1_5end | |association_with_transcript=0bp_to_ENST00000445189,ENST00000542312,uc011aht.1_5end | ||
|cluster_id=chr22:20877924..20877934,+ | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_39_at_MED15_5end | |description=CAGE_peak_39_at_MED15_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000148!6.16e-20!10;CL:0000541!6.16e-20!10;CL:0000147!6.37e-14!14;CL:0002567!1.60e-13!3;CL:0000710!2.07e-09!20;CL:0002077!2.33e-08!33;CL:0000325!2.47e-08!39;CL:0000333!1.32e-07!41 | |ontology_enrichment_celltype=CL:0000148!6.16e-20!10;CL:0000541!6.16e-20!10;CL:0000147!6.37e-14!14;CL:0002567!1.60e-13!3;CL:0000710!2.07e-09!20;CL:0002077!2.33e-08!33;CL:0000325!2.47e-08!39;CL:0000333!1.32e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.05e-88;10!CL:0002567;6.07e-75;3!CL:0000147;1.65e-63;14!CL:0000710;1.36e-44;20!CL:0000075;3.96e-33;27!CL:0002566;3.58e-26;1!CL:0002077;6.60e-23;34!CL:0000346;1.74e-09;3!CL:1000428;1.74e-09;3!CL:0000149;1.75e-07;4 | |ontology_enrichment_celltype_v019=CL:0000148;1.05e-88;10!CL:0002567;6.07e-75;3!CL:0000147;1.65e-63;14!CL:0000710;1.36e-44;20!CL:0000075;3.96e-33;27!CL:0002566;3.58e-26;1!CL:0002077;6.60e-23;34!CL:0000346;1.74e-09;3!CL:1000428;1.74e-09;3!CL:0000149;1.75e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.05e-88,10;CL:0000541,1.05e-88,10;CL:0002567,6.07e-75,3;CL:0000147,1.65e-63,14;CL:0000710,1.36e-44,20;CL:0000075,3.96e-33,27;CL:0000333,3.25e-28,41;CL:0002077,2.26e-26,34;CL:0002566,3.58e-26,1;CL:0000133,6.10e-20,59;CL:0000221,1.86e-16,72;CL:0000346,1.67e-09,3;CL:1000428,1.67e-09,3;CL:0000149,1.80e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000133;1.63e-11;59!CL:0000221;5.46e-08;72 | |ontology_enrichment_development_v019=CL:0000133;1.63e-11;59!CL:0000221;5.46e-08;72 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;1.46e-13;2 | |ontology_enrichment_disease_v019=DOID:1909;1.46e-13;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,1.55e-13,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.74e-09;3!UBERON:0001992;1.74e-09;3!UBERON:0001003;1.70e-07;15!UBERON:0007376;1.70e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000412;1.74e-09;3!UBERON:0001992;1.74e-09;3!UBERON:0001003;1.70e-07;15!UBERON:0007376;1.70e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.67e-09,3;UBERON:0001992,1.67e-09,3;UBERON:0001003,1.70e-07,15;UBERON:0007376,1.70e-07,15;UBERON:0007383,1.70e-07,15 | |||
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| ||
|short_description=p39@MED15 | |short_description=p39@MED15 | ||
}} | }} |
Latest revision as of 05:02, 19 September 2015
Short description: | p39@MED15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_MED15_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 0bp_to_ENST00000445189, ENST00000542312, uc011aht.1_5end |
EntrezGene: | MED15 |
HGNC: | 14248 |
UniProt: | C9JGN2B4DGD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.05e-88 | 10 |
melanoblast | 1.05e-88 | 10 |
light melanocyte | 6.07e-75 | 3 |
pigment cell | 1.65e-63 | 14 |
neurecto-epithelial cell | 1.36e-44 | 20 |
columnar/cuboidal epithelial cell | 3.96e-33 | 27 |
migratory neural crest cell | 3.25e-28 | 41 |
ecto-epithelial cell | 2.26e-26 | 34 |
dark melanocyte | 3.58e-26 | 1 |
neurectodermal cell | 6.10e-20 | 59 |
ectodermal cell | 1.86e-16 | 72 |
hair follicle dermal papilla cell | 1.67e-09 | 3 |
stem cell of epidermis | 1.67e-09 | 3 |
visual pigment cell | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.67e-09 | 3 |
papillary layer of dermis | 1.67e-09 | 3 |
skin epidermis | 1.70e-07 | 15 |
outer epithelium | 1.70e-07 | 15 |
enveloping layer of ectoderm | 1.70e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.55e-13 | 2 |