FFCP PHASE1:Hg19::chr22:21133701..21133717,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3053 | |EntrezGene=3053 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4838 | |HGNC=4838 | ||
|TSSclassifier=strong | |||
|UniProt=P05546 | |UniProt=P05546 | ||
|association_with_transcript=45bp_to_X03498_5end | |association_with_transcript=45bp_to_X03498_5end | ||
|cluster_id=chr22:21133701..21133717,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_4_at_SERPIND1_5end | |description=CAGE_peak_4_at_SERPIND1_5end | ||
|id=chr22:21133701..21133717,+ | |id=chr22:21133701..21133717,+ | ||
|ontology_enrichment_celltype=CL:0000181!4.96e-10!12;CL:0000417!4.96e-10!12;CL:0000668!4.96e-10!12;CL:0000414!4.96e-10!12;CL:0000412!4.96e-10!12;CL:0000182!4.96e-10!12 | |ontology_enrichment_celltype=CL:0000181!4.96e-10!12;CL:0000417!4.96e-10!12;CL:0000668!4.96e-10!12;CL:0000414!4.96e-10!12;CL:0000412!4.96e-10!12;CL:0000182!4.96e-10!12 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.11e-21;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@SERPIND1 | |short_description=p4@SERPIND1 | ||
}} | }} |
Latest revision as of 05:17, 19 September 2015
Short description: | p4@SERPIND1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SERPIND1_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 45bp_to_X03498_5end |
EntrezGene: | SERPIND1 |
HGNC: | 4838 |
UniProt: | P05546 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 3.11e-21 | 2 |
future caudate nucleus | 3.11e-21 | 2 |
dorsal plus ventral thalamus | 6.96e-21 | 2 |
thalamic complex | 6.96e-21 | 2 |
caudate-putamen | 1.22e-14 | 3 |
dorsal striatum | 1.22e-14 | 3 |
corpus striatum | 2.53e-11 | 4 |
striatum | 2.53e-11 | 4 |
ventral part of telencephalon | 2.53e-11 | 4 |
future corpus striatum | 2.53e-11 | 4 |
regional part of diencephalon | 3.79e-11 | 4 |
liver | 2.17e-09 | 19 |
digestive gland | 2.17e-09 | 19 |
liver bud | 2.17e-09 | 19 |
hepatic diverticulum | 3.04e-08 | 22 |
liver primordium | 3.04e-08 | 22 |
digestive tract diverticulum | 6.29e-08 | 23 |
epithelial sac | 2.28e-07 | 25 |
epithelium of foregut-midgut junction | 2.28e-07 | 25 |
anatomical boundary | 2.28e-07 | 25 |
hepatobiliary system | 2.28e-07 | 25 |
foregut-midgut junction | 2.28e-07 | 25 |
septum transversum | 2.28e-07 | 25 |
sac | 4.02e-07 | 26 |
telencephalic nucleus | 5.08e-07 | 7 |
diencephalon | 6.39e-07 | 7 |
future diencephalon | 6.39e-07 | 7 |