FFCP PHASE1:Hg19::chr1:1846725..1846735,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=163688 | |EntrezGene=163688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24193 | |HGNC=24193 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000482402_5end | |association_with_transcript=20bp_to_ENST00000482402_5end | ||
|cluster_id=chr1:1846725..1846735,+ | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_7_at_CALML6_5end | |description=CAGE_peak_7_at_CALML6_5end | ||
|id=chr1:1846725..1846735,+ | |id=chr1:1846725..1846735,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;4.61e-26;1!UBERON:0008814;7.30e-14;2!UBERON:0010056;7.30e-14;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!2.97e-31!2;UBERON:0001723!9.47e-22!3;UBERON:0001033!9.47e-22!3;UBERON:0010056!9.47e-22!3;UBERON:0000989!7.57e-17!1;UBERON:0008811!7.57e-17!1;UBERON:0006258!7.57e-17!1;UBERON:0005876!7.57e-17!1;UBERON:0004874!7.57e-17!1;UBERON:0002426!1.04e-16!1;UBERON:0003831!1.04e-16!1;UBERON:0003898!1.04e-16!1;UBERON:0004830!1.04e-16!1;UBERON:0001774!1.04e-16!1;UBERON:0003830!1.04e-16!1;UBERON:0005175!1.04e-16!1;UBERON:0003897!1.04e-16!1;UBERON:0001103!1.04e-16!1;UBERON:0010084!1.04e-16!1;UBERON:0007029!1.21e-16!1;UBERON:0002372!3.07e-16!1;UBERON:0001961!3.07e-16!1;UBERON:0001744!3.07e-16!1;UBERON:0001735!3.07e-16!1;UBERON:0001042!1.85e-14!10;UBERON:0009145!1.85e-14!10;UBERON:0006562!3.34e-13!11;UBERON:0001630!5.08e-09!2;UBERON:0005090!5.08e-09!2;UBERON:0003127!8.09e-09!2;UBERON:0000078!2.71e-08!18;UBERON:0001557!6.94e-08!19;UBERON:0000166!3.49e-07!21;UBERON:0000974!5.11e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;3.94e-34;3!UBERON:0001033;3.94e-34;3!UBERON:0000989;4.61e-26;1!UBERON:0008811;4.61e-26;1!UBERON:0002426;7.62e-26;1!UBERON:0003831;7.62e-26;1!UBERON:0003898;7.62e-26;1!UBERON:0004830;7.62e-26;1!UBERON:0003830;7.62e-26;1!UBERON:0005175;7.62e-26;1!UBERON:0001774;7.62e-26;1!UBERON:0001103;7.62e-26;1!UBERON:0007029;1.11e-25;1!UBERON:0001134;1.16e-14;16!UBERON:0002036;1.16e-14;16!UBERON:0005090;1.21e-13;2!UBERON:0001630;1.21e-13;2!UBERON:0000341;1.46e-13;2!UBERON:0002385;3.92e-08;31!UBERON:0001015;3.92e-08;31!UBERON:0000383;3.92e-08;31!UBERON:0000014;1.98e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,3.94e-34,3;UBERON:0001033,3.94e-34,3;UBERON:0010056,3.94e-34,3;UBERON:0000989,4.61e-26,1;UBERON:0008811,4.61e-26,1;UBERON:0006258,4.61e-26,1;UBERON:0005876,4.61e-26,1;UBERON:0004874,4.61e-26,1;UBERON:0002426,7.62e-26,1;UBERON:0003831,7.62e-26,1;UBERON:0003898,7.62e-26,1;UBERON:0004830,7.62e-26,1;UBERON:0003830,7.62e-26,1;UBERON:0005175,7.62e-26,1;UBERON:0001774,7.62e-26,1;UBERON:0001103,7.62e-26,1;UBERON:0010084,7.62e-26,1;UBERON:0007029,9.79e-26,1;UBERON:0005090,1.21e-13,2;UBERON:0001630,1.21e-13,2;UBERON:0000341,1.55e-13,2;UBERON:0001042,5.41e-11,10;UBERON:0009145,5.41e-11,10;UBERON:0006562,4.42e-10,11;UBERON:0000014,1.92e-07,4 | |||
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|short_description=p7@CALML6 | |short_description=p7@CALML6 | ||
}} | }} |
Latest revision as of 05:19, 19 September 2015
Short description: | p7@CALML6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CALML6_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 20bp_to_ENST00000482402_5end |
EntrezGene: | CALML6 |
HGNC: | 24193 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 3.94e-34 | 3 |
gustatory system | 3.94e-34 | 3 |
future tongue | 3.94e-34 | 3 |
penis | 4.61e-26 | 1 |
intromittent organ | 4.61e-26 | 1 |
lateral plate mesenchyme | 4.61e-26 | 1 |
undifferentiated genital tubercle | 4.61e-26 | 1 |
somatopleure | 4.61e-26 | 1 |
chest muscle | 7.62e-26 | 1 |
respiratory system muscle | 7.62e-26 | 1 |
skeletal muscle of trunk | 7.62e-26 | 1 |
respiratory system skeletal muscle | 7.62e-26 | 1 |
thoracic segment muscle | 7.62e-26 | 1 |
chest organ | 7.62e-26 | 1 |
muscle of trunk | 7.62e-26 | 1 |
diaphragm | 7.62e-26 | 1 |
future diaphragm | 7.62e-26 | 1 |
surface | 9.79e-26 | 1 |
muscle structure | 1.21e-13 | 2 |
muscle organ | 1.21e-13 | 2 |
throat | 1.55e-13 | 2 |
chordate pharynx | 5.41e-11 | 10 |
pharyngeal region of foregut | 5.41e-11 | 10 |
pharynx | 4.42e-10 | 11 |
zone of skin | 1.92e-07 | 4 |