FFCP PHASE1:Hg19::chr1:1846804..1846823,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=163688 | |EntrezGene=163688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24193 | |HGNC=24193 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000462293_5end | |association_with_transcript=-24bp_to_ENST00000462293_5end | ||
|cluster_id=chr1:1846804..1846823,+ | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_3_at_CALML6_5end | |description=CAGE_peak_3_at_CALML6_5end | ||
|id=chr1:1846804..1846823,+ | |id=chr1:1846804..1846823,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.71e-19;1!UBERON:0006298;4.69e-19;1!UBERON:0008814;1.43e-10;2!UBERON:0010056;1.43e-10;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!2.56e-29!2;UBERON:0001723!2.25e-20!3;UBERON:0001033!2.25e-20!3;UBERON:0010056!2.25e-20!3;UBERON:0000989!8.63e-16!1;UBERON:0008811!8.63e-16!1;UBERON:0006258!8.63e-16!1;UBERON:0005876!8.63e-16!1;UBERON:0004874!8.63e-16!1;UBERON:0002426!9.99e-16!1;UBERON:0003831!9.99e-16!1;UBERON:0003898!9.99e-16!1;UBERON:0004830!9.99e-16!1;UBERON:0001774!9.99e-16!1;UBERON:0003830!9.99e-16!1;UBERON:0005175!9.99e-16!1;UBERON:0003897!9.99e-16!1;UBERON:0001103!9.99e-16!1;UBERON:0010084!9.99e-16!1;UBERON:0007029!1.34e-15!1;UBERON:0001736!2.38e-15!1;UBERON:0006298!2.38e-15!1;UBERON:0002372!2.75e-15!1;UBERON:0001961!2.75e-15!1;UBERON:0001744!2.75e-15!1;UBERON:0001735!2.75e-15!1;UBERON:0001042!1.54e-13!10;UBERON:0009145!1.54e-13!10;UBERON:0000078!5.60e-13!18;UBERON:0006562!2.30e-12!11;UBERON:0000166!3.64e-11!21;UBERON:0001630!1.61e-08!2;UBERON:0005090!1.61e-08!2;UBERON:0000165!1.95e-08!28;UBERON:0000930!1.95e-08!28;UBERON:0003127!2.00e-08!2;UBERON:0001829!2.48e-08!2;UBERON:0001557!2.18e-07!19;UBERON:0001004!7.47e-07!72;UBERON:0000161!8.66e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;1.42e-36;2!UBERON:0001723;2.07e-25;3!UBERON:0001033;2.07e-25;3!UBERON:0000989;1.71e-19;1!UBERON:0008811;1.71e-19;1!UBERON:0002426;1.71e-19;1!UBERON:0003831;1.71e-19;1!UBERON:0003898;1.71e-19;1!UBERON:0004830;1.71e-19;1!UBERON:0003830;1.71e-19;1!UBERON:0005175;1.71e-19;1!UBERON:0001774;1.71e-19;1!UBERON:0001103;1.71e-19;1!UBERON:0007029;2.97e-19;1!UBERON:0001736;4.69e-19;1!UBERON:0000974;6.50e-13;6!UBERON:0001134;7.98e-11;16!UBERON:0002036;7.98e-11;16!UBERON:0005090;1.98e-10;2!UBERON:0001630;1.98e-10;2!UBERON:0003127;2.60e-10;2!UBERON:0001829;3.27e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.18e-36,2;UBERON:0001723,2.07e-25,3;UBERON:0001033,2.07e-25,3;UBERON:0010056,2.07e-25,3;UBERON:0000989,1.56e-19,1;UBERON:0008811,1.56e-19,1;UBERON:0006258,1.56e-19,1;UBERON:0005876,1.56e-19,1;UBERON:0004874,1.56e-19,1;UBERON:0002426,1.88e-19,1;UBERON:0003831,1.88e-19,1;UBERON:0003898,1.88e-19,1;UBERON:0004830,1.88e-19,1;UBERON:0003830,1.88e-19,1;UBERON:0005175,1.88e-19,1;UBERON:0001774,1.88e-19,1;UBERON:0001103,1.88e-19,1;UBERON:0010084,1.88e-19,1;UBERON:0007029,2.71e-19,1;UBERON:0001736,5.62e-19,1;UBERON:0006298,5.62e-19,1;UBERON:0005090,2.07e-10,2;UBERON:0001630,2.07e-10,2;UBERON:0003127,2.72e-10,2;UBERON:0001829,3.58e-10,2;UBERON:0001042,2.62e-08,10;UBERON:0009145,2.62e-08,10;UBERON:0000974,3.90e-08,10;UBERON:0000166,4.78e-08,22;UBERON:0006562,1.24e-07,11;UBERON:0000153,2.36e-07,62;UBERON:0007811,2.36e-07,62 | |||
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|short_description=p3@CALML6 | |short_description=p3@CALML6 | ||
}} | }} |
Latest revision as of 05:21, 19 September 2015
Short description: | p3@CALML6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CALML6_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | -24bp_to_ENST00000462293_5end |
EntrezGene: | CALML6 |
HGNC: | 24193 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 1.18e-36 | 2 |
tongue | 2.07e-25 | 3 |
gustatory system | 2.07e-25 | 3 |
future tongue | 2.07e-25 | 3 |
penis | 1.56e-19 | 1 |
intromittent organ | 1.56e-19 | 1 |
lateral plate mesenchyme | 1.56e-19 | 1 |
undifferentiated genital tubercle | 1.56e-19 | 1 |
somatopleure | 1.56e-19 | 1 |
chest muscle | 1.88e-19 | 1 |
respiratory system muscle | 1.88e-19 | 1 |
skeletal muscle of trunk | 1.88e-19 | 1 |
respiratory system skeletal muscle | 1.88e-19 | 1 |
thoracic segment muscle | 1.88e-19 | 1 |
chest organ | 1.88e-19 | 1 |
muscle of trunk | 1.88e-19 | 1 |
diaphragm | 1.88e-19 | 1 |
future diaphragm | 1.88e-19 | 1 |
surface | 2.71e-19 | 1 |
submandibular gland | 5.62e-19 | 1 |
submandibular gland primordium | 5.62e-19 | 1 |
muscle structure | 2.07e-10 | 2 |
muscle organ | 2.07e-10 | 2 |
open tracheal system trachea | 2.72e-10 | 2 |
major salivary gland | 3.58e-10 | 2 |
chordate pharynx | 2.62e-08 | 10 |
pharyngeal region of foregut | 2.62e-08 | 10 |
neck | 3.90e-08 | 10 |
oral opening | 4.78e-08 | 22 |
pharynx | 1.24e-07 | 11 |
anterior region of body | 2.36e-07 | 62 |
craniocervical region | 2.36e-07 | 62 |