FFCP PHASE1:Hg19::chr12:54674482..54674520,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:54674482..54674520,+
|short_description=p1@HNRNPA1
|description=CAGE_peak_1_at_HNRNPA1_5end
|association_with_transcript=0bp_to_NM_002136,NM_031157,uc001s...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3178 | |EntrezGene=3178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5031 | |HGNC=5031 | ||
|TSSclassifier=strong | |||
|UniProt=P09651 | |UniProt=P09651 | ||
|association_with_transcript=0bp_to_NM_002136,NM_031157,uc001sfl.2,uc001sfm.2,uc001sfn.2,uc001sfo.3,uc009zng.2,uc009znh.2,uc009zni.2_5end | |||
|cluster_id=chr12:54674482..54674520,+ | |||
|coexpression_cluster_id=C896 | |||
|description=CAGE_peak_1_at_HNRNPA1_5end | |||
|id=chr12:54674482..54674520,+ | |||
|ontology_enrichment_celltype=CL:0000012!2.90e-19!682;CL:0000548!9.82e-19!679;CL:0000004!9.82e-19!679;CL:0000255!9.82e-19!679;CL:0000066!2.80e-13!254;CL:0000003!4.24e-11!722;CL:0000063!3.47e-08!578;CL:0000144!9.18e-08!625;CL:0002321!1.12e-07!248;CL:0000220!3.95e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.19e-13,253;CL:0002321,3.39e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.68e-41!235;DOID:14566!1.55e-39!239;DOID:0050687!4.00e-20!143;DOID:0050686!1.66e-18!137;DOID:305!1.39e-17!106;DOID:2531!3.97e-17!51;DOID:0060083!3.97e-17!51;DOID:1240!6.27e-14!39;DOID:8692!1.74e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.55e-11;39!DOID:8692;4.04e-11;31!DOID:2531;1.61e-10;51!DOID:0060083;1.61e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.68e-41,235;DOID:14566,1.55e-39,239;DOID:0050687,4.00e-20,143;DOID:0050686,1.66e-18,137;DOID:305,1.39e-17,106;DOID:2531,3.97e-17,51;DOID:0060083,3.97e-17,51;DOID:1240,6.27e-14,39;DOID:8692,1.74e-11,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@HNRNPA1 | |||
}} | }} |
Latest revision as of 05:35, 19 September 2015
Short description: | p1@HNRNPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HNRNPA1_5end |
Coexpression cluster: | C896_retinoblastoma_iPS_acute_lymphoma_chronic_Burkitt_testicular |
Association with transcript: | 0bp_to_NM_002136, NM_031157, uc001sfl.2, uc001sfm.2, uc001sfn.2, uc001sfo.3, uc009zng.2, uc009znh.2, uc009zni.2_5end |
EntrezGene: | HNRNPA1 |
HGNC: | 5031 |
UniProt: | P09651 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.19e-13 | 253 |
embryonic cell | 3.39e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.68e-41 | 235 |
disease of cellular proliferation | 1.55e-39 | 239 |
cell type cancer | 4.00e-20 | 143 |
organ system cancer | 1.66e-18 | 137 |
carcinoma | 1.39e-17 | 106 |
hematologic cancer | 3.97e-17 | 51 |
immune system cancer | 3.97e-17 | 51 |
leukemia | 6.27e-14 | 39 |
myeloid leukemia | 1.74e-11 | 31 |