FFCP PHASE1:Hg19::chr18:29769995..29770009,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:29769995..29770009,+ to FFCP PHASE1:Hg19::chr18:29769995..29770009,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4225 | |EntrezGene=4225 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7020 | |HGNC=7020 | ||
|TSSclassifier=strong | |||
|UniProt=Q16820 | |UniProt=Q16820 | ||
|association_with_transcript=8bp_to_ENST00000269202,NM_005925,uc002kxj.3_5end | |||
|cluster_id=chr18:29769995..29770009,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_MEP1B_5end | |||
|id=chr18:29769995..29770009,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002253;9.46e-10;2!CL:0002535;1.22e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,9.46e-10,2;CL:0002535,1.22e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.33e-17;1!UBERON:0006242;1.33e-17;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;2.97e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.82e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001155!5.68e-22!9;UBERON:0000059!5.87e-18!11;UBERON:0000160!4.99e-17!27;UBERON:0005409!5.30e-13!35;UBERON:0001154!3.31e-09!1;UBERON:0001153!3.31e-09!1;UBERON:0002146!6.72e-09!1;UBERON:0005623!6.72e-09!1;UBERON:0002363!1.16e-08!1;UBERON:0007647!1.16e-08!1;UBERON:0010115!1.16e-08!1;UBERON:0004907!2.70e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001155;9.45e-46;9!UBERON:0000160;1.23e-44;17!UBERON:0000059;1.73e-37;11!UBERON:0005409;6.67e-35;22!UBERON:0004921;2.32e-21;33!UBERON:0001154;1.33e-17;1!UBERON:0001153;1.33e-17;1!UBERON:0009854;1.33e-17;1!UBERON:0002108;1.84e-14;4!UBERON:0004907;3.26e-14;5!UBERON:0006955;1.22e-09;2!UBERON:0004801;1.22e-09;2!UBERON:0001555;1.64e-09;54!UBERON:0002114;6.88e-07;2!UBERON:0002110;9.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,9.46e-46,9;UBERON:0000160,1.23e-44,17;UBERON:0000059,1.73e-37,11;UBERON:0005409,7.45e-31,25;UBERON:0001154,1.22e-17,1;UBERON:0001153,1.22e-17,1;UBERON:0001045,1.22e-17,1;UBERON:0002108,1.84e-14,4;UBERON:0004907,3.15e-14,5;UBERON:0006955,1.22e-09,2;UBERON:0004801,1.22e-09,2;UBERON:0002114,6.88e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,1.65770349318689,9.82537716631677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,115.551533622277,4.97630965539252,352.503394545807,1.22206028986725,0,0,0,0,0,0,0,0,0,0,25.4080503702194,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,0,0,1.88754497648161,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,3.18321240258189,0,0,0,0,1001.25752729247,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.9738251550472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,1.65770349318689,9.82537716631677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,115.551533622277,4.97630965539252,352.503394545807,1.22206028986725,0,0,0,0,0,0,0,0,0,0,25.4080503702194,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,0,0,1.88754497648161,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,3.18321240258189,0,0,0,0,1001.25752729247,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.9738251550472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@MEP1B | |||
}} | }} |
Latest revision as of 06:17, 19 September 2015
Short description: | p1@MEP1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MEP1B_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 8bp_to_ENST00000269202, NM_005925, uc002kxj.3_5end |
EntrezGene: | MEP1B |
HGNC: | 7020 |
UniProt: | Q16820 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 9.46e-10 | 2 |
epithelial cell of cervix | 1.22e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
colon | 9.46e-46 | 9 |
intestine | 1.23e-44 | 17 |
large intestine | 1.73e-37 | 11 |
gastrointestinal system | 7.45e-31 | 25 |
vermiform appendix | 1.22e-17 | 1 |
caecum | 1.22e-17 | 1 |
midgut | 1.22e-17 | 1 |
small intestine | 1.84e-14 | 4 |
lower digestive tract | 3.15e-14 | 5 |
uterine epithelium | 1.22e-09 | 2 |
cervix epithelium | 1.22e-09 | 2 |
duodenum | 6.88e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.82e-11 | 14 |