FFCP PHASE1:Hg19::chr15:78384901..78384904,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=646892 | |EntrezGene=646892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34549 | |HGNC=34549 | ||
|TSSclassifier=strong | |||
|UniProt=A6NKC9 | |UniProt=A6NKC9 | ||
|association_with_transcript=-22bp_to_ENST00000328828,NM_001101404,uc010blb.1_5end | |association_with_transcript=-22bp_to_ENST00000328828,NM_001101404,uc010blb.1_5end | ||
|cluster_id=chr15:78384901..78384904,+ | |||
|coexpression_cluster_id=C201 | |coexpression_cluster_id=C201 | ||
|description=CAGE_peak_3_at_SH2D7_5end | |description=CAGE_peak_3_at_SH2D7_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001155!1.54e-21!9;UBERON:0000160!3.15e-20!27;UBERON:0000059!1.11e-17!11;UBERON:0005409!1.31e-15!35;UBERON:0002171!3.76e-13!1;UBERON:0006518!3.76e-13!1;UBERON:0008949!3.76e-13!1;UBERON:0000101!3.76e-13!1;UBERON:0002167!3.76e-13!1;UBERON:0001154!4.23e-13!1;UBERON:0001153!4.23e-13!1;UBERON:0004119!2.43e-08!169;UBERON:0000925!2.43e-08!169;UBERON:0006595!2.43e-08!169;UBERON:0004921!8.68e-08!129;UBERON:0004185!8.68e-08!129;UBERON:0002108!1.09e-07!14;UBERON:0001007!1.11e-07!155;UBERON:0001555!1.11e-07!155;UBERON:0007026!1.11e-07!155;UBERON:0007023!3.61e-07!115;UBERON:0001255!4.69e-07!2;UBERON:0001556!4.69e-07!2 | |ontology_enrichment_uberon=UBERON:0001155!1.54e-21!9;UBERON:0000160!3.15e-20!27;UBERON:0000059!1.11e-17!11;UBERON:0005409!1.31e-15!35;UBERON:0002171!3.76e-13!1;UBERON:0006518!3.76e-13!1;UBERON:0008949!3.76e-13!1;UBERON:0000101!3.76e-13!1;UBERON:0002167!3.76e-13!1;UBERON:0001154!4.23e-13!1;UBERON:0001153!4.23e-13!1;UBERON:0004119!2.43e-08!169;UBERON:0000925!2.43e-08!169;UBERON:0006595!2.43e-08!169;UBERON:0004921!8.68e-08!129;UBERON:0004185!8.68e-08!129;UBERON:0002108!1.09e-07!14;UBERON:0001007!1.11e-07!155;UBERON:0001555!1.11e-07!155;UBERON:0007026!1.11e-07!155;UBERON:0007023!3.61e-07!115;UBERON:0001255!4.69e-07!2;UBERON:0001556!4.69e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;6.64e-46;17!UBERON:0005409;4.33e-36;22!UBERON:0001155;1.05e-33;9!UBERON:0000059;9.32e-28;11!UBERON:0002108;4.34e-27;4!UBERON:0004921;5.01e-22;33!UBERON:0002114;2.74e-12;2!UBERON:0001555;1.04e-09;54 | |ontology_enrichment_uberon_v019=UBERON:0000160;6.64e-46;17!UBERON:0005409;4.33e-36;22!UBERON:0001155;1.05e-33;9!UBERON:0000059;9.32e-28;11!UBERON:0002108;4.34e-27;4!UBERON:0004921;5.01e-22;33!UBERON:0002114;2.74e-12;2!UBERON:0001555;1.04e-09;54 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.64e-46,17;UBERON:0001155,1.11e-33,9;UBERON:0005409,5.23e-32,25;UBERON:0000059,9.75e-28,11;UBERON:0002108,4.06e-27,4;UBERON:0002114,2.59e-12,2;UBERON:0004921,2.29e-07,118 | |||
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|short_description=p3@SH2D7 | |short_description=p3@SH2D7 | ||
}} | }} |
Latest revision as of 06:31, 19 September 2015
Short description: | p3@SH2D7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SH2D7_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | -22bp_to_ENST00000328828, NM_001101404, uc010blb.1_5end |
EntrezGene: | SH2D7 |
HGNC: | 34549 |
UniProt: | A6NKC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 6.64e-46 | 17 |
colon | 1.11e-33 | 9 |
gastrointestinal system | 5.23e-32 | 25 |
large intestine | 9.75e-28 | 11 |
small intestine | 4.06e-27 | 4 |
duodenum | 2.59e-12 | 2 |
subdivision of digestive tract | 2.29e-07 | 118 |