FFCP PHASE1:Hg19::chr18:3219881..3219924,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8736 | |EntrezGene=8736 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7613 | |HGNC=7613 | ||
|TSSclassifier=strong | |||
|UniProt=P52179,A8MX12 | |UniProt=P52179,A8MX12 | ||
|association_with_transcript=181bp_to_ENST00000261606,ENST00000356443,ENST00000400569,NM_003803,NM_019856,uc002klp.2,uc002klq.2_5end | |association_with_transcript=181bp_to_ENST00000261606,ENST00000356443,ENST00000400569,NM_003803,NM_019856,uc002klp.2,uc002klq.2_5end | ||
|cluster_id=chr18:3219881..3219924,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_2_at_MYOM1_5end | |description=CAGE_peak_2_at_MYOM1_5end | ||
|id=chr18:3219881..3219924,- | |id=chr18:3219881..3219924,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.73e-08;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.81e-64!115;UBERON:0001049!3.14e-20!57;UBERON:0005068!3.14e-20!57;UBERON:0006241!3.14e-20!57;UBERON:0007135!3.14e-20!57;UBERON:0002616!1.13e-16!59;UBERON:0003075!2.07e-16!86;UBERON:0007284!2.07e-16!86;UBERON:0003080!5.76e-16!42;UBERON:0002780!2.70e-15!41;UBERON:0001890!2.70e-15!41;UBERON:0006240!2.70e-15!41;UBERON:0002346!5.00e-15!90;UBERON:0002020!8.78e-14!34;UBERON:0003528!8.78e-14!34;UBERON:0005743!9.63e-14!86;UBERON:0001893!1.29e-13!34;UBERON:0001017!3.04e-13!82;UBERON:0000955!5.15e-13!69;UBERON:0006238!5.15e-13!69;UBERON:0002791!5.60e-13!33;UBERON:0001869!2.17e-12!32;UBERON:0000073!3.26e-11!94;UBERON:0001016!3.26e-11!94;UBERON:0003056!1.45e-10!61;UBERON:0002619!8.92e-10!22;UBERON:0000153!1.63e-09!129;UBERON:0007811!1.63e-09!129;UBERON:0000033!1.25e-08!123;UBERON:0001950!1.90e-08!20;UBERON:0000956!4.34e-08!25;UBERON:0000203!4.34e-08!25;UBERON:0002308!5.78e-08!9;UBERON:0000125!5.78e-08!9;UBERON:0002298!6.37e-08!8;UBERON:0002420!6.44e-08!9;UBERON:0007245!6.44e-08!9;UBERON:0010009!6.44e-08!9;UBERON:0010011!6.44e-08!9;UBERON:0000454!6.44e-08!9;UBERON:0004121!2.61e-07!169;UBERON:0003135!3.86e-07!11;UBERON:0000924!8.08e-07!173;UBERON:0006601!8.08e-07!173;UBERON:0000481!8.61e-07!347 | |ontology_enrichment_uberon=UBERON:0007023!3.81e-64!115;UBERON:0001049!3.14e-20!57;UBERON:0005068!3.14e-20!57;UBERON:0006241!3.14e-20!57;UBERON:0007135!3.14e-20!57;UBERON:0002616!1.13e-16!59;UBERON:0003075!2.07e-16!86;UBERON:0007284!2.07e-16!86;UBERON:0003080!5.76e-16!42;UBERON:0002780!2.70e-15!41;UBERON:0001890!2.70e-15!41;UBERON:0006240!2.70e-15!41;UBERON:0002346!5.00e-15!90;UBERON:0002020!8.78e-14!34;UBERON:0003528!8.78e-14!34;UBERON:0005743!9.63e-14!86;UBERON:0001893!1.29e-13!34;UBERON:0001017!3.04e-13!82;UBERON:0000955!5.15e-13!69;UBERON:0006238!5.15e-13!69;UBERON:0002791!5.60e-13!33;UBERON:0001869!2.17e-12!32;UBERON:0000073!3.26e-11!94;UBERON:0001016!3.26e-11!94;UBERON:0003056!1.45e-10!61;UBERON:0002619!8.92e-10!22;UBERON:0000153!1.63e-09!129;UBERON:0007811!1.63e-09!129;UBERON:0000033!1.25e-08!123;UBERON:0001950!1.90e-08!20;UBERON:0000956!4.34e-08!25;UBERON:0000203!4.34e-08!25;UBERON:0002308!5.78e-08!9;UBERON:0000125!5.78e-08!9;UBERON:0002298!6.37e-08!8;UBERON:0002420!6.44e-08!9;UBERON:0007245!6.44e-08!9;UBERON:0010009!6.44e-08!9;UBERON:0010011!6.44e-08!9;UBERON:0000454!6.44e-08!9;UBERON:0004121!2.61e-07!169;UBERON:0003135!3.86e-07!11;UBERON:0000924!8.08e-07!173;UBERON:0006601!8.08e-07!173;UBERON:0000481!8.61e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.39e-09;114!UBERON:0004151;2.58e-08;3!UBERON:0003978;3.11e-08;3!UBERON:0000946;3.11e-08;3!UBERON:0002298;4.83e-08;6!UBERON:0001134;5.68e-08;16!UBERON:0002036;5.68e-08;16!UBERON:0000922;8.90e-08;49!UBERON:0004921;3.91e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.12e-35,114;UBERON:0003103,1.81e-08,68;UBERON:0004151,2.58e-08,3;UBERON:0003978,3.12e-08,3;UBERON:0009751,3.12e-08,3;UBERON:0000946,3.12e-08,3;UBERON:0002523,3.12e-08,3;UBERON:0005983,3.12e-08,3;UBERON:0002165,3.12e-08,3;UBERON:0002062,3.12e-08,3;UBERON:0007280,3.12e-08,3;UBERON:0002298,4.64e-08,6 | |||
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| ||
|short_description=p2@MYOM1 | |short_description=p2@MYOM1 | ||
}} | }} |
Latest revision as of 07:26, 19 September 2015
Short description: | p2@MYOM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYOM1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 181bp_to_ENST00000261606, ENST00000356443, ENST00000400569, NM_003803, NM_019856, uc002klp.2, uc002klq.2_5end |
EntrezGene: | MYOM1 |
HGNC: | 7613 |
UniProt: | P52179A8MX12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.12e-35 | 114 |
compound organ | 1.81e-08 | 68 |
cardiac chamber | 2.58e-08 | 3 |
valve | 3.12e-08 | 3 |
cardiac mesenchyme | 3.12e-08 | 3 |
cardial valve | 3.12e-08 | 3 |
tunica intima | 3.12e-08 | 3 |
heart layer | 3.12e-08 | 3 |
endocardium | 3.12e-08 | 3 |
endocardial cushion | 3.12e-08 | 3 |
presumptive endocardium | 3.12e-08 | 3 |
brainstem | 4.64e-08 | 6 |