FFCP PHASE1:Hg19::chr18:3219959..3219972,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8736 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7613 | |||
|TSSclassifier=strong | |||
|UniProt=P52179,A8MX12 | |||
|association_with_transcript=133bp_to_ENST00000261606,ENST00000356443,ENST00000400569,NM_003803,NM_019856,uc002klp.2,uc002klq.2_5end | |||
|cluster_id=chr18:3219959..3219972,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_3_at_MYOM1_5end | |||
|id=chr18:3219959..3219972,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;6.91e-08;65!UBERON:0005062;2.14e-07;4!UBERON:0007284;2.14e-07;4!UBERON:0003104;2.47e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;2.02e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.02e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-49!115;UBERON:0001049!8.74e-07!57;UBERON:0005068!8.74e-07!57;UBERON:0006241!8.74e-07!57;UBERON:0007135!8.74e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;7.75e-10;3!UBERON:0003978;9.37e-10;3!UBERON:0000946;9.37e-10;3!UBERON:0007100;2.18e-08;25!UBERON:0000922;4.03e-08;49!UBERON:0005090;2.65e-07;2!UBERON:0001630;2.65e-07;2!UBERON:0000341;5.23e-07;2!UBERON:0002081;6.22e-07;2!UBERON:0002133;6.50e-07;2!UBERON:0007023;6.59e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.38e-24,114;UBERON:0004151,7.76e-10,3;UBERON:0003978,9.24e-10,3;UBERON:0009751,9.24e-10,3;UBERON:0000946,9.24e-10,3;UBERON:0002523,9.24e-10,3;UBERON:0005983,9.24e-10,3;UBERON:0002165,9.24e-10,3;UBERON:0002062,9.24e-10,3;UBERON:0007280,9.24e-10,3;UBERON:0003103,3.00e-08,68;UBERON:0007100,1.25e-07,27;UBERON:0005090,2.65e-07,2;UBERON:0001630,2.65e-07,2;UBERON:0000341,5.23e-07,2;UBERON:0002081,6.23e-07,2;UBERON:0010227,6.23e-07,2;UBERON:0002133,6.41e-07,2 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85779347979291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63239701580021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,76.0530208930985,83.5403134175982,101.02507404252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,5.97637867556789,0,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0,0,0.0852266274161009,1.51354460599453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,5.55448424582997,0,0,0,0,1.01489521846434,0,0,0.476463550915578,0.411362273086194,1.29694662238543,2.16012574895246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0,4.54175355742871,0,2.563197838382,0,0,2.07875276582847,0,0,0.281338832821026,0,0,0,2.39097585901284,0.828851746593443,5.54252045279407,0,0,0,0,0,0,3.84709281984041,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0.31900115973192,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0.158936578980379,0,0,0,0,1.99052386215701,1.59223616106011,1.22206028986725,0,0,0,0.134802265961354,80.2577647298789,0.468528891450678,0,0,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,9.78469342155369,0,0,0,0,6.013319022282,0,13.5588444468319,0,0,0.0633107959558787,0,0,1.06726497369676,0,0,0,2.23073497220554,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,32.955323350126,124.204949814333,10.7680953686522,141.572411353785,312.90578909156,195.944539633964,316.098238050047,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0.157611414598396,1.41627387964495,0,0,0,38.5935476241618,207.23478672438,0,0,0,0,0,0.082092520749339,0,0,41.7673865982535,15.9008266694666,0.517131825446202,0,0,0,0,1.41483874589699,0,0,0,0,0,0,0.2506898940227,0,1.31149052283922,0,0,0,0,0.573409195690071,0,0.993542447062135,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8194679406265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0.451261970095544,0,28.9160184156244,0,0,0,0.270150338473579,0,0,0.126831620387814,0,0.548257766857182,48.6286954821508,0,0,0,0.672567444437648,0,0.227662191351298,0,0,0,0.203909198930495,0.0657727735628491,0,0,2.43328587836593,0,0,0,0,0,1.00067161847319,0,0,0.173858272302579,0,0,0,0,2.15113679410139,0,0,0,0,0,0,0,0,0,143.729201855713,204.812299678213,107.862742114453,18.9427287293064,0,0,0,0,0.439762066981716,0,0.848915739187391,1.5299169235277,0.470317296361523,7.84474629612498,0,0,0,2.113278637917,0,0,0.773494655682926,0,0,0,0,1.46067277649303,4.58729283404541,0,0,0.135982980381829,0,2.1161073620616,0,0,0,0,0,0,0.101988829741982,0,0.36757959813938,0.250707539292375,1.59135266258303,0,0,0.20686599172379,49.6835177829285,14.5219303192882,0,0.0620747142958579,0,2.29129769801394,1.81905470062397,32.8752289324412,29.7742971944195,5.388164241167,2.07994395638761,21.6229231754909,0,0,0,0,79.7779204171745,2.07810455110873,0.406896178315738,0,3.22038069745642,0 | |||
|short_description=p3@MYOM1 | |||
}} |
Latest revision as of 07:27, 19 September 2015
Short description: | p3@MYOM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYOM1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 133bp_to_ENST00000261606, ENST00000356443, ENST00000400569, NM_003803, NM_019856, uc002klp.2, uc002klq.2_5end |
EntrezGene: | MYOM1 |
HGNC: | 7613 |
UniProt: | P52179A8MX12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.38e-24 | 114 |
cardiac chamber | 7.76e-10 | 3 |
valve | 9.24e-10 | 3 |
cardiac mesenchyme | 9.24e-10 | 3 |
cardial valve | 9.24e-10 | 3 |
tunica intima | 9.24e-10 | 3 |
heart layer | 9.24e-10 | 3 |
endocardium | 9.24e-10 | 3 |
endocardial cushion | 9.24e-10 | 3 |
presumptive endocardium | 9.24e-10 | 3 |
compound organ | 3.00e-08 | 68 |
primary circulatory organ | 1.25e-07 | 27 |
muscle structure | 2.65e-07 | 2 |
muscle organ | 2.65e-07 | 2 |
throat | 5.23e-07 | 2 |
cardiac atrium | 6.23e-07 | 2 |
future cardiac atrium | 6.23e-07 | 2 |
atrioventricular valve | 6.41e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.02e-07 | 2 |