FFCP PHASE1:Hg19::chr18:3219979..3219991,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8736 | |EntrezGene=8736 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7613 | |HGNC=7613 | ||
|TSSclassifier=strong | |||
|UniProt=P52179,A8MX12 | |UniProt=P52179,A8MX12 | ||
|association_with_transcript=114bp_to_ENST00000261606,ENST00000356443,ENST00000400569,NM_003803,NM_019856,uc002klp.2,uc002klq.2_5end | |association_with_transcript=114bp_to_ENST00000261606,ENST00000356443,ENST00000400569,NM_003803,NM_019856,uc002klp.2,uc002klq.2_5end | ||
|cluster_id=chr18:3219979..3219991,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_4_at_MYOM1_5end | |description=CAGE_peak_4_at_MYOM1_5end | ||
|id=chr18:3219979..3219991,- | |id=chr18:3219979..3219991,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.09e-08;2!UBERON:0006603;3.63e-08;65!UBERON:0003104;2.91e-07;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.03e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.06e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.43e-67!115;UBERON:0001049!5.26e-20!57;UBERON:0005068!5.26e-20!57;UBERON:0006241!5.26e-20!57;UBERON:0007135!5.26e-20!57;UBERON:0002616!1.43e-17!59;UBERON:0002020!2.61e-17!34;UBERON:0003528!2.61e-17!34;UBERON:0001893!5.48e-17!34;UBERON:0003075!8.97e-17!86;UBERON:0007284!8.97e-17!86;UBERON:0002791!4.79e-16!33;UBERON:0002346!1.43e-15!90;UBERON:0001869!4.91e-15!32;UBERON:0005743!6.70e-15!86;UBERON:0002780!1.35e-14!41;UBERON:0001890!1.35e-14!41;UBERON:0006240!1.35e-14!41;UBERON:0000955!1.43e-14!69;UBERON:0006238!1.43e-14!69;UBERON:0003080!4.16e-14!42;UBERON:0001017!5.95e-14!82;UBERON:0000073!1.35e-12!94;UBERON:0001016!1.35e-12!94;UBERON:0002619!1.04e-11!22;UBERON:0001950!2.93e-11!20;UBERON:0000956!6.16e-10!25;UBERON:0000203!6.16e-10!25;UBERON:0002308!7.05e-10!9;UBERON:0000125!7.05e-10!9;UBERON:0000153!7.88e-10!129;UBERON:0007811!7.88e-10!129;UBERON:0002420!8.52e-10!9;UBERON:0007245!8.52e-10!9;UBERON:0010009!8.52e-10!9;UBERON:0010011!8.52e-10!9;UBERON:0000454!8.52e-10!9;UBERON:0003056!8.98e-10!61;UBERON:0002298!3.13e-09!8;UBERON:0000033!3.70e-09!123;UBERON:0000481!1.08e-08!347;UBERON:0003135!1.57e-08!11;UBERON:0004121!5.79e-08!169;UBERON:0000924!1.53e-07!173;UBERON:0006601!1.53e-07!173;UBERON:0004111!1.86e-07!241;UBERON:0000025!1.89e-07!194;UBERON:0009663!2.50e-07!7;UBERON:0003076!3.17e-07!15;UBERON:0003057!3.17e-07!15;UBERON:0000062!4.82e-07!511;UBERON:0001871!6.39e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!4.43e-67!115;UBERON:0001049!5.26e-20!57;UBERON:0005068!5.26e-20!57;UBERON:0006241!5.26e-20!57;UBERON:0007135!5.26e-20!57;UBERON:0002616!1.43e-17!59;UBERON:0002020!2.61e-17!34;UBERON:0003528!2.61e-17!34;UBERON:0001893!5.48e-17!34;UBERON:0003075!8.97e-17!86;UBERON:0007284!8.97e-17!86;UBERON:0002791!4.79e-16!33;UBERON:0002346!1.43e-15!90;UBERON:0001869!4.91e-15!32;UBERON:0005743!6.70e-15!86;UBERON:0002780!1.35e-14!41;UBERON:0001890!1.35e-14!41;UBERON:0006240!1.35e-14!41;UBERON:0000955!1.43e-14!69;UBERON:0006238!1.43e-14!69;UBERON:0003080!4.16e-14!42;UBERON:0001017!5.95e-14!82;UBERON:0000073!1.35e-12!94;UBERON:0001016!1.35e-12!94;UBERON:0002619!1.04e-11!22;UBERON:0001950!2.93e-11!20;UBERON:0000956!6.16e-10!25;UBERON:0000203!6.16e-10!25;UBERON:0002308!7.05e-10!9;UBERON:0000125!7.05e-10!9;UBERON:0000153!7.88e-10!129;UBERON:0007811!7.88e-10!129;UBERON:0002420!8.52e-10!9;UBERON:0007245!8.52e-10!9;UBERON:0010009!8.52e-10!9;UBERON:0010011!8.52e-10!9;UBERON:0000454!8.52e-10!9;UBERON:0003056!8.98e-10!61;UBERON:0002298!3.13e-09!8;UBERON:0000033!3.70e-09!123;UBERON:0000481!1.08e-08!347;UBERON:0003135!1.57e-08!11;UBERON:0004121!5.79e-08!169;UBERON:0000924!1.53e-07!173;UBERON:0006601!1.53e-07!173;UBERON:0004111!1.86e-07!241;UBERON:0000025!1.89e-07!194;UBERON:0009663!2.50e-07!7;UBERON:0003076!3.17e-07!15;UBERON:0003057!3.17e-07!15;UBERON:0000062!4.82e-07!511;UBERON:0001871!6.39e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.20e-09;25!UBERON:0005090;3.16e-09;2!UBERON:0001630;3.16e-09;2!UBERON:0000341;4.65e-09;2!UBERON:0002107;1.81e-07;19!UBERON:0006925;1.81e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.04e-20,114;UBERON:0005090,3.10e-09,2;UBERON:0001630,3.10e-09,2;UBERON:0000341,4.85e-09,2;UBERON:0007100,7.90e-09,27;UBERON:0002107,1.84e-07,19;UBERON:0006925,1.84e-07,19;UBERON:0008836,1.84e-07,19;UBERON:0003103,2.51e-07,68 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,96.3338264645915,72.7292140341443,73.8487383351755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,6.28550171051106,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.93105944893709,0,0,0,0,1.01489521846434,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,2.67464122265948,0,0,0.890894042497916,0,0.994147647766298,0.140669416410513,0,0,0,1.9924798825107,0.828851746593443,9.82537716631677,0,0,0,0,0,0,2.46608514092334,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0,0.438770794307945,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,2.98578579323551,2.29989667708682,2.4441205797345,0,0,0,0.134802265961354,4.81546588379273,0.468528891450678,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,2.32773639572207,0,1.12990370390266,0,0,0.0633107959558787,0,0,0,0,0,0,2.05913997434357,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,7.81990723562312,14.6662671367478,0.717873024576814,19.3688630484021,50.2194476319788,20.7549455420941,39.5710652946818,0,1.16495949527454,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.209818352539992,0,0,0,7.14695326373367,28.4699547257136,0,0,0,0,0,0,0,0,35.3190883164179,17.2258955585888,0.387848869084652,0.52893040697076,0,0,0,0.471612915298998,0,0,0,0,0,0,1.0027595760908,0.612691153526923,0.655745261419609,0,0,0,0.3755727921195,0.573409195690071,0.443716206147409,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.451261970095544,0,9.37816813479711,0,0,0,0.135075169236789,0,0.413373593002368,0.126831620387814,0,0,5.45832296228224,0,0,0,0,0,0,0,0,0,0.203909198930495,0.131545547125698,0,0,0.863424021355654,0.157115589916002,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,9.71143255781842,19.7112589163994,17.397216470073,3.39997695141398,0,0,0,0,0,0,1.31196068783506,0.655678681511872,0,6.12870804384764,0,0.588925401344836,0.297046400327086,0,0,0,0.386747327841463,0,0,0,0,0.730336388246517,1.37618785021362,0.286679166302903,0,0.339957450954573,0,1.0580536810308,0,0,0,0,0,0,0.407955318967927,0,0.275684698604535,0.250707539292375,0.303114792872958,0,0,0,5.11761556562354,3.57096647195611,0,0,0,0.190941474834495,0.202117188958219,5.44291869742403,1.02669990325584,0.26940821205835,0.430333232356058,1.99596213927608,0,0,0,0,4.69281884806909,2.44482888365733,0,0,1.00636896795513,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,96.3338264645915,72.7292140341443,73.8487383351755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,6.28550171051106,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.93105944893709,0,0,0,0,1.01489521846434,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,2.67464122265948,0,0,0.890894042497916,0,0.994147647766298,0.140669416410513,0,0,0,1.9924798825107,0.828851746593443,9.82537716631677,0,0,0,0,0,0,2.46608514092334,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0,0.438770794307945,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,2.98578579323551,2.29989667708682,2.4441205797345,0,0,0,0.134802265961354,4.81546588379273,0.468528891450678,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,2.32773639572207,0,1.12990370390266,0,0,0.0633107959558787,0,0,0,0,0,0,2.05913997434357,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,7.81990723562312,14.6662671367478,0.717873024576814,19.3688630484021,50.2194476319788,20.7549455420941,39.5710652946818,0,1.16495949527454,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.209818352539992,0,0,0,7.14695326373367,28.4699547257136,0,0,0,0,0,0,0,0,35.3190883164179,17.2258955585888,0.387848869084652,0.52893040697076,0,0,0,0.471612915298998,0,0,0,0,0,0,1.0027595760908,0.612691153526923,0.655745261419609,0,0,0,0.3755727921195,0.573409195690071,0.443716206147409,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.451261970095544,0,9.37816813479711,0,0,0,0.135075169236789,0,0.413373593002368,0.126831620387814,0,0,5.45832296228224,0,0,0,0,0,0,0,0,0,0.203909198930495,0.131545547125698,0,0,0.863424021355654,0.157115589916002,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,9.71143255781842,19.7112589163994,17.397216470073,3.39997695141398,0,0,0,0,0,0,1.31196068783506,0.655678681511872,0,6.12870804384764,0,0.588925401344836,0.297046400327086,0,0,0,0.386747327841463,0,0,0,0,0.730336388246517,1.37618785021362,0.286679166302903,0,0.339957450954573,0,1.0580536810308,0,0,0,0,0,0,0.407955318967927,0,0.275684698604535,0.250707539292375,0.303114792872958,0,0,0,5.11761556562354,3.57096647195611,0,0,0,0.190941474834495,0.202117188958219,5.44291869742403,1.02669990325584,0.26940821205835,0.430333232356058,1.99596213927608,0,0,0,0,4.69281884806909,2.44482888365733,0,0,1.00636896795513,0 | ||
|short_description=p4@MYOM1 | |short_description=p4@MYOM1 | ||
}} | }} |
Latest revision as of 07:28, 19 September 2015
Short description: | p4@MYOM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MYOM1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 114bp_to_ENST00000261606, ENST00000356443, ENST00000400569, NM_003803, NM_019856, uc002klp.2, uc002klq.2_5end |
EntrezGene: | MYOM1 |
HGNC: | 7613 |
UniProt: | P52179A8MX12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.04e-20 | 114 |
muscle structure | 3.10e-09 | 2 |
muscle organ | 3.10e-09 | 2 |
throat | 4.85e-09 | 2 |
primary circulatory organ | 7.90e-09 | 27 |
liver | 1.84e-07 | 19 |
digestive gland | 1.84e-07 | 19 |
liver bud | 1.84e-07 | 19 |
compound organ | 2.51e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.06e-09 | 2 |