FFCP PHASE1:Hg19::chr12:56105967..56105977,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3679 | |EntrezGene=3679 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6143 | |HGNC=6143 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_ENST00000553276_5end | |association_with_transcript=10bp_to_ENST00000553276_5end | ||
|cluster_id=chr12:56105967..56105977,- | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_16_at_ITGA7_5end | |description=CAGE_peak_16_at_ITGA7_5end | ||
|id=chr12:56105967..56105977,- | |id=chr12:56105967..56105977,- | ||
|ontology_enrichment_celltype=CL:0000136!5.74e-19!15 | |ontology_enrichment_celltype=CL:0000136!5.74e-19!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.41e-67;13!CL:0002617;2.85e-10;2!CL:0002521;2.32e-07;3!CL:0002615;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.69e-58,15;CL:0002617,2.72e-10,2;CL:0002521,2.32e-07,3;CL:0002615,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;3.56e-19;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.87e-33!115;UBERON:0001049!4.38e-14!57;UBERON:0005068!4.38e-14!57;UBERON:0006241!4.38e-14!57;UBERON:0007135!4.38e-14!57;UBERON:0001017!1.40e-13!82;UBERON:0001893!3.62e-13!34;UBERON:0003075!4.51e-13!86;UBERON:0007284!4.51e-13!86;UBERON:0005743!1.00e-12!86;UBERON:0002780!2.72e-12!41;UBERON:0001890!2.72e-12!41;UBERON:0006240!2.72e-12!41;UBERON:0002346!2.88e-12!90;UBERON:0001869!5.90e-12!32;UBERON:0003080!6.20e-12!42;UBERON:0002791!1.85e-11!33;UBERON:0001950!3.78e-11!20;UBERON:0000073!4.59e-11!94;UBERON:0001016!4.59e-11!94;UBERON:0002020!4.63e-11!34;UBERON:0003528!4.63e-11!34;UBERON:0002616!2.82e-10!59;UBERON:0002619!4.85e-10!22;UBERON:0000955!2.29e-09!69;UBERON:0006238!2.29e-09!69;UBERON:0000956!1.06e-08!25;UBERON:0000203!1.06e-08!25;UBERON:0004121!1.86e-08!169;UBERON:0000924!4.03e-08!173;UBERON:0006601!4.03e-08!173;UBERON:0000341!7.39e-08!2;UBERON:0002360!1.68e-07!2;UBERON:0000094!1.68e-07!2;UBERON:0007645!1.68e-07!2;UBERON:0007100!2.19e-07!27;UBERON:0003056!2.32e-07!61;UBERON:0000153!5.59e-07!129;UBERON:0007811!5.59e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;3.56e-19;1!UBERON:0002146;3.56e-19;1!UBERON:0002082;3.56e-19;1!UBERON:0005623;3.56e-19;1!UBERON:0002190;2.32e-07;3!UBERON:0003978;2.88e-07;3!UBERON:0004151;2.88e-07;3!UBERON:0000946;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,2.71e-19,1;UBERON:0002082,2.71e-19,1;UBERON:0010226,2.71e-19,1;UBERON:0002146,4.69e-19,1;UBERON:0005623,4.69e-19,1;UBERON:0002190,2.32e-07,3;UBERON:0004151,2.63e-07,3;UBERON:0003978,3.16e-07,3;UBERON:0009751,3.16e-07,3;UBERON:0000946,3.16e-07,3;UBERON:0002523,3.16e-07,3;UBERON:0005983,3.16e-07,3;UBERON:0002165,3.16e-07,3;UBERON:0002062,3.16e-07,3;UBERON:0007280,3.16e-07,3 | |||
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| ||
|short_description=p16@ITGA7 | |short_description=p16@ITGA7 | ||
}} | }} |
Latest revision as of 07:50, 19 September 2015
Short description: | p16@ITGA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ITGA7_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 10bp_to_ENST00000553276_5end |
EntrezGene: | ITGA7 |
HGNC: | 6143 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.69e-58 | 15 |
adipocyte of breast | 2.72e-10 | 2 |
subcutaneous fat cell | 2.32e-07 | 3 |
adipocyte of omentum tissue | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 2.71e-19 | 1 |
cardiac ventricle | 2.71e-19 | 1 |
future cardiac ventricle | 2.71e-19 | 1 |
pulmonary valve | 4.69e-19 | 1 |
semi-lunar valve | 4.69e-19 | 1 |
subcutaneous adipose tissue | 2.32e-07 | 3 |
cardiac chamber | 2.63e-07 | 3 |
valve | 3.16e-07 | 3 |
cardiac mesenchyme | 3.16e-07 | 3 |
cardial valve | 3.16e-07 | 3 |
tunica intima | 3.16e-07 | 3 |
heart layer | 3.16e-07 | 3 |
endocardium | 3.16e-07 | 3 |
endocardial cushion | 3.16e-07 | 3 |
presumptive endocardium | 3.16e-07 | 3 |