FFCP PHASE1:Hg19::chr19:50016671..50016675,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2217 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3621 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=219bp_to_uc002pof.1_5end | |||
|cluster_id=chr19:50016671..50016675,+ | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_22_at_FCGRT_5end | |||
|id=chr19:50016671..50016675,+ | |||
|ontology_enrichment_celltype=CL:0002619!6.66e-16!3;CL:0002575!2.11e-11!2 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.99e-32;5!CL:0002321;1.42e-11;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!3.47e-13!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.84e-98;10!DOID:3095;3.08e-45;22!DOID:2994;3.08e-45;22!DOID:169;3.11e-27;6!DOID:3193;5.15e-21;2!DOID:962;5.15e-21;2!DOID:1192;1.71e-14;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.85e-98,10;DOID:3095,3.09e-45,22;DOID:2994,3.09e-45,22;DOID:169,3.11e-27,6;DOID:3193,3.81e-21,2;DOID:962,3.81e-21,2;DOID:1192,1.40e-14,3;DOID:0050687,1.55e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;7.72e-89;4!UBERON:0000923;7.72e-89;4!UBERON:0010316;7.72e-89;4!UBERON:0005291;7.72e-89;4!UBERON:0002050;2.52e-71;5!UBERON:0005423;2.52e-71;5!UBERON:0000013;1.99e-32;5!UBERON:0002410;1.99e-32;5!UBERON:0003714;5.15e-21;2!UBERON:0000010;1.48e-18;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.99e-32,5;UBERON:0002410,1.99e-32,5;UBERON:0003714,3.81e-21,2;UBERON:0000010,1.48e-18,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0,0,0.795229689809303,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10086159299127,0,1.18812770967818,5.52694792264376,1.36329340684902,1.67593475391973,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p22@FCGRT | |||
}} |
Latest revision as of 07:59, 19 September 2015
Short description: | p22@FCGRT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_FCGRT_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | 219bp_to_uc002pof.1_5end |
EntrezGene: | FCGRT |
HGNC: | 3621 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.99e-32 | 5 |
autonomic nervous system | 1.99e-32 | 5 |
neural tissue | 3.81e-21 | 2 |
peripheral nervous system | 1.48e-18 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.85e-98 | 10 |
germ cell and embryonal cancer | 3.09e-45 | 22 |
germ cell cancer | 3.09e-45 | 22 |
neuroendocrine tumor | 3.11e-27 | 6 |
peripheral nerve sheath neoplasm | 3.81e-21 | 2 |
neurofibroma | 3.81e-21 | 2 |
peripheral nervous system neoplasm | 1.40e-14 | 3 |
cell type cancer | 1.55e-07 | 143 |