FFCP PHASE1:Hg19::chr1:81771806..81771876,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=23266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=18582 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B1ALU1,B1ALU5,B1ALU4,B1ALU3,O95490,B1ALU2 | ||
|association_with_transcript=0bp_to_ENST00000370721,ENST00000370723,ENST00000370725,ENST00000370727,ENST00000370728,ENST00000370730,ENST00000473719,ENST00000492666,uc001dis.2_5end | |association_with_transcript=0bp_to_ENST00000370721,ENST00000370723,ENST00000370725,ENST00000370727,ENST00000370728,ENST00000370730,ENST00000473719,ENST00000492666,uc001dis.2_5end | ||
|cluster_id=chr1:81771806..81771876,+ | |cluster_id=chr1:81771806..81771876,+ | ||
Latest revision as of 09:46, 19 September 2015
| Short description: | p1@LPHN2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_LPHN2_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | 0bp_to_ENST00000370721, ENST00000370723, ENST00000370725, ENST00000370727, ENST00000370728, ENST00000370730, ENST00000473719, ENST00000492666, uc001dis.2_5end |
| EntrezGene: | LPHN2 |
| HGNC: | 18582 |
| UniProt: | B1ALU1B1ALU5B1ALU4B1ALU3O95490B1ALU2 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@LPHN2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 1.00e-56 | 56 |
| neural rod | 1.00e-56 | 56 |
| future spinal cord | 1.00e-56 | 56 |
| neural keel | 1.00e-56 | 56 |
| adult organism | 1.45e-56 | 114 |
| regional part of nervous system | 1.63e-54 | 53 |
| regional part of brain | 1.63e-54 | 53 |
| regional part of forebrain | 1.39e-53 | 41 |
| forebrain | 1.39e-53 | 41 |
| anterior neural tube | 1.39e-53 | 41 |
Showing 1 to 10 of 71 entries
