FFCP PHASE1:Hg19::chr1:82165287..82165302,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:82165287..82165302,+
|short_description=p12@LPHN2
|description=CAGE_peak_12_at_LPHN2_5end
|association_with_transcript=-152bp_to_ENST00000359929,uc001dit.3...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23266 | |EntrezGene=23266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18582 | |HGNC=18582 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-152bp_to_ENST00000359929,uc001dit.3_5end | |||
|cluster_id=chr1:82165287..82165302,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_12_at_LPHN2_5end | |||
|id=chr1:82165287..82165302,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.88e-14!43;CL:0000622!9.66e-13!5;CL:0002623!2.13e-12!3;CL:0000223!5.99e-11!59;CL:0000154!1.26e-10!6;CL:0000066!1.76e-07!254;CL:0000150!4.37e-07!9;CL:0002368!5.99e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000313;5.85e-14;1!CL:0000159;1.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,4.53e-14,1;CL:0000159,1.12e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.50e-14;1!UBERON:0000358;5.85e-14;1!UBERON:0008814;9.25e-08;2!UBERON:0010056;9.25e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;5.85e-14;1!DOID:3151;1.33e-13;1!DOID:3149;1.33e-13;1!DOID:3451;1.93e-07;2!DOID:4159;1.93e-07;2!DOID:0060122;1.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,4.53e-14,1;DOID:3151,2.07e-13,1;DOID:3149,2.07e-13,1;DOID:3451,2.40e-07,2;DOID:4159,2.40e-07,2;DOID:0060122,2.40e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.82e-11!72;UBERON:0000166!7.37e-11!21;UBERON:0000341!6.09e-09!2;UBERON:0000165!8.45e-08!28;UBERON:0000930!8.45e-08!28;UBERON:0000065!8.62e-08!53;UBERON:0005795!1.12e-07!22;UBERON:0000161!1.38e-07!35;UBERON:0000078!1.98e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;5.98e-18;3!UBERON:0001033;5.98e-18;3!UBERON:0005795;5.85e-14;1!UBERON:0004911;5.85e-14;1!UBERON:0002372;1.33e-13;1!UBERON:0007029;1.33e-13;1!UBERON:0001961;1.33e-13;1!UBERON:0001744;1.33e-13;1!UBERON:0001042;1.33e-13;1!UBERON:0001735;1.33e-13;1!UBERON:0000014;3.21e-13;4!UBERON:0000165;3.93e-11;28!UBERON:0000002;4.03e-09;6!UBERON:0001560;4.03e-09;6!UBERON:0000341;1.05e-07;2!UBERON:0004909;1.27e-07;2!UBERON:0006562;1.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,7.09e-18,3;UBERON:0001033,7.09e-18,3;UBERON:0010056,7.09e-18,3;UBERON:0000166,3.95e-14,22;UBERON:0004911,4.53e-14,1;UBERON:0007029,9.73e-14,1;UBERON:0002372,1.25e-13,1;UBERON:0001961,1.25e-13,1;UBERON:0001744,1.25e-13,1;UBERON:0001735,1.25e-13,1;UBERON:0000014,3.42e-13,4;UBERON:0000161,4.00e-12,36;UBERON:0001042,6.74e-12,10;UBERON:0009145,6.74e-12,10;UBERON:0006562,7.22e-11,11;UBERON:0000165,1.04e-10,29;UBERON:0000930,1.04e-10,29;UBERON:0000002,3.56e-09,6;UBERON:0001560,3.56e-09,6;UBERON:0000341,1.05e-07,2;UBERON:0004909,1.12e-07,2;UBERON:0003102,3.47e-07,99;UBERON:0000153,6.27e-07,62;UBERON:0007811,6.27e-07,62 | |||
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| ||
|short_description=p12@LPHN2 | |||
}} | }} |
Latest revision as of 09:59, 19 September 2015
Short description: | p12@LPHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_LPHN2_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -152bp_to_ENST00000359929, uc001dit.3_5end |
EntrezGene: | LPHN2 |
HGNC: | 18582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 4.53e-14 | 1 |
seromucus secreting cell | 1.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
tongue | 7.09e-18 | 3 |
gustatory system | 7.09e-18 | 3 |
future tongue | 7.09e-18 | 3 |
oral opening | 3.95e-14 | 22 |
epithelium of female gonad | 4.53e-14 | 1 |
surface | 9.73e-14 | 1 |
tonsil | 1.25e-13 | 1 |
mucosa-associated lymphoid tissue | 1.25e-13 | 1 |
lymphoid tissue | 1.25e-13 | 1 |
tonsillar ring | 1.25e-13 | 1 |
zone of skin | 3.42e-13 | 4 |
orifice | 4.00e-12 | 36 |
chordate pharynx | 6.74e-12 | 10 |
pharyngeal region of foregut | 6.74e-12 | 10 |
pharynx | 7.22e-11 | 11 |
mouth | 1.04e-10 | 29 |
stomodeum | 1.04e-10 | 29 |
uterine cervix | 3.56e-09 | 6 |
neck of organ | 3.56e-09 | 6 |
throat | 1.05e-07 | 2 |
epithelium of gonad | 1.12e-07 | 2 |
surface structure | 3.47e-07 | 99 |
anterior region of body | 6.27e-07 | 62 |
craniocervical region | 6.27e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 4.53e-14 | 1 |
skin squamous cell carcinoma | 2.07e-13 | 1 |
keratoacanthoma | 2.07e-13 | 1 |
skin carcinoma | 2.40e-07 | 2 |
skin cancer | 2.40e-07 | 2 |
integumentary system cancer | 2.40e-07 | 2 |