FFCP PHASE1:Hg19::chr3:66024494..66024557,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9223 | |EntrezGene=9223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=946 | |HGNC=946 | ||
|TSSclassifier=strong | |||
|UniProt=Q96QZ7 | |UniProt=Q96QZ7 | ||
|association_with_transcript=0bp_to_ENST00000464060,NM_001033057,NM_004742,NM_015520,uc003dmm.2,uc003dmn.2,uc003dmo.2,uc003dmp.2,uc003dmr.2_5end | |association_with_transcript=0bp_to_ENST00000464060,NM_001033057,NM_004742,NM_015520,uc003dmm.2,uc003dmn.2,uc003dmo.2,uc003dmp.2,uc003dmr.2_5end | ||
|cluster_id=chr3:66024494..66024557,- | |||
|description=CAGE_peak_1_at_MAGI1_5end | |description=CAGE_peak_1_at_MAGI1_5end | ||
|id=chr3:66024494..66024557,- | |id=chr3:66024494..66024557,- | ||
|ontology_enrichment_celltype=CL:0000057!6.66e-07!75 | |ontology_enrichment_celltype=CL:0000057!6.66e-07!75 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.98e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.13e-17!365;UBERON:0007023!5.21e-17!115;UBERON:0000477!2.43e-15!286;UBERON:0004111!2.87e-15!241;UBERON:0000025!4.23e-13!194;UBERON:0000468!5.96e-13!659;UBERON:0000483!1.54e-12!309;UBERON:0000119!3.19e-12!312;UBERON:0000481!1.52e-11!347;UBERON:0000467!1.18e-08!625;UBERON:0002100!1.24e-08!216;UBERON:0000480!2.05e-08!626;UBERON:0000466!7.95e-08!126;UBERON:0002323!1.63e-07!46;UBERON:0004458!1.74e-07!49;UBERON:0001049!2.82e-07!57;UBERON:0005068!2.82e-07!57;UBERON:0006241!2.82e-07!57;UBERON:0007135!2.82e-07!57;UBERON:0005409!4.58e-07!35;UBERON:0003914!7.28e-07!118;UBERON:0002616!9.04e-07!59;UBERON:0001007!9.06e-07!155;UBERON:0001555!9.06e-07!155;UBERON:0007026!9.06e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.31e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.16e-17,114;UBERON:0004111,6.46e-14,240;UBERON:0000025,3.76e-12,192;UBERON:0000483,3.02e-11,306;UBERON:0000119,6.00e-11,309;UBERON:0011216,3.80e-09,223;UBERON:0002553,1.97e-08,61;UBERON:0002100,3.23e-08,199;UBERON:0003886,1.88e-07,54;UBERON:0010314,2.51e-07,132;UBERON:0002323,2.79e-07,46;UBERON:0004458,2.91e-07,49;UBERON:0003914,9.59e-07,117 | |||
|phase1_expression=30.8853244759946,20.1254492457524,32.7014217502653,22.0161256376887,16.9845215882369,26.1701557230111,12.6649939084155,1.89515962028049,1.04474251279935,6.88055022204225,4.18680700783456,1.09220686065086,1.31883489114227,0.495065411840187,0.994192127183747,2.6893005858071,2.41077811209591,2.92124036154949,2.43966399395253,0.861847406537515,1.02000345622126,0.626909442956176,1.43117993565528,2.18999080116615,1.63205431473244,0.229240217243854,0.410502947249729,0.314843125254717,0,0,0.464448369948228,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23779651843358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0.263384084775077,0,0,0.822405995998037,0,0.32592226663359,0,0,0.222820913770347,1.17842362989935,0.443067789167242,0,0.384273959177026,0.650296737799391,0.164437904603676,0.552700035571697,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5045493051169,2.01210257911091,6.26526553033299,5.78302643815306,6.51739283826656,4.49024208778554,1.5905718941022,0.486634870302636,4.72674085820339,6.43015252641436,6.67544371267758,13.6218238517621,0,1.11235332835329,0,0,0.132957960518865,0,0,0,4.37277296206751,9.46258054616737,11.8027770546582,9.61023501270816,3.77549492588915,7.15306909044175,5.22487416342026,33.5941786920128,35.576626268671,73.9732554209921,12.4877088303836,21.2876189601184,20.0130887189499,8.08858776760911,7.29127753093584,24.1109266367015,29.8624065592806,23.5357994210143,10.7321646226118,8.54339093611316,9.52649068438118,0,0,0,29.3213451500238,11.5233765614768,25.9521994393909,27.8231522126349,8.86670955495893,11.7742296029885,9.60740961567345,5.42668606517752,9.33633106199299,3.50247747381189,3.75962377160955,2.11900398702904,4.03323147135999,0.70296429550139,1.5608003841516,1.1409436430889,1.04614076386261,4.57994544710683,5.82742599725274,6.17983549489893,2.65400422631361,5.03620700978249,1.54988671763648,13.0680314301026,13.8469480395992,2.73048408581408,2.87447256726495,5.72342787443825,6.75640007308606,1.10825646193673,17.1201272143527,22.9865846849265,19.8314237756708,2.04177929688038,25.8321075391961,9.39652510801697,11.6562545637759,22.8069233024146,6.49230934202165,30.4015837253842,14.1448810812008,30.7172924679105,15.5899208257918,28.2725827153408,13.9915845936295,6.14255015911485,23.7856426986132,5.74286959897549,9.6649537616978,2.12586938479627,2.18196896472668,1.43402297694502,7.9282908984237,7.68672656264614,3.48581828608555,5.18305275076852,5.04641701751257,8.39447925874409,7.8224766164908,13.5080597020506,1.38134921352481,4.17931135228781,2.16563844500876,2.60274960087657,1.85443159085912,1.92808823906786,2.09558548191549,1.96091499683166,2.37270619111097,2.42696354688296,2.35465758150415,1.92373578473195,16.9775754563669,1.40241773803446,6.5851841813024,2.94017422771084,46.8993628840774,31.450470933684,48.4447723478751,0,14.5126357480874,3.77449182656756,0.878002283269004,1.1240175325762,0.703702806881416,0.277765335475589,0,0,4.3299402607582,3.82570336417754,11.1538259524031,10.3943842387973,3.70388410061289,8.37118269832232,8.69224837755203,16.3112370798026,0,0,0,0,1.34385702559088,0.850650583454319,0.179117045405697,0,0,0,0,2.07328115540772,0.720599767084807,0.37872730027914,0.126995788584338,0,0,0,0.411309970813294,0.300343057843917,0.571652865261156,2.01835951821649,1.74384027533312,2.2001485746285,16.8053230485111,10.7296933755565,2.535908257668,5.58470044828228,3.12022310734098,1.28603687131071,0,3.19706614819319,4.14636181608628,0,1.64648067356154,2.60588947434988,1.77695974371273,0,19.2921201318135,15.6876022548053,22.0940310512346,0,0,0,11.0227433526128,2.29723871668228,24.2482738569221,9.55556624006023,8.83548186966649,11.997084537073,0.112085143993527,0,0,0,1.52456774533478,0,1.54657762555539,0.335032530668698,1.27587750330633,0,0,0,0.736148950314839,1.50051156317903,0.542530047399471,14.3499894456257,11.9547422494098,8.51593041183247,15.3455253640454,6.01892199455438,9.09630016223939,3.10419213877515,9.29915837949611,9.40282759562686,5.73431855489347,0.587403472388222,0.686286847621712,0,0,0,0,0,1.20956117331872,36.9680633649978,64.1471048344101,31.7145906709373,52.280772896326,36.3312146837359,50.3472773179491,28.1994326245483,7.86469438393543,6.39222211127257,8.29484275739472,1.55776328755086,8.94819914141686,13.2945394550784,1.80455823272956,1.65745780084613,1.83703117063371,1.45672934405374,3.54035920390445,2.25599806453706,1.38627606787947,3.13739907670742,0,2.21658420675039,6.8240030442538,4.08224892663638,8.42072072798343,12.3381802152231,2.16757150035082,2.50844886927427,1.27438136522519,0.831076008928724,2.68649705666614,0,0,1.28225062558195,7.87235149679294,2.92840555197873,21.0203663761353,1.37354197227515,2.64030399745882,1.72279661398852,2.60024098414608,8.03419649220798,2.70678011217942,5.23765298189791,5.2191249406884,4.68644346447404,6.1229539574916,6.67076792005451,4.43178462563725,5.43095417445098,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| ||
|short_description=p1@MAGI1 | |short_description=p1@MAGI1 | ||
}} | }} |
Latest revision as of 10:23, 19 September 2015
Short description: | p1@MAGI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAGI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000464060, NM_001033057, NM_004742, NM_015520, uc003dmm.2, uc003dmn.2, uc003dmo.2, uc003dmp.2, uc003dmr.2_5end |
EntrezGene: | MAGI1 |
HGNC: | 946 |
UniProt: | Q96QZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.98e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.16e-17 | 114 |
anatomical conduit | 6.46e-14 | 240 |
tube | 3.76e-12 | 192 |
epithelium | 3.02e-11 | 306 |
cell layer | 6.00e-11 | 309 |
organ system subdivision | 3.80e-09 | 223 |
anatomical cavity | 1.97e-08 | 61 |
trunk | 3.23e-08 | 199 |
body cavity precursor | 1.88e-07 | 54 |
structure with developmental contribution from neural crest | 2.51e-07 | 132 |
body cavity | 2.79e-07 | 46 |
body cavity or lining | 2.91e-07 | 49 |
epithelial tube | 9.59e-07 | 117 |