FFCP PHASE1:Hg19::chr3:69811826..69811835,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4286 | |EntrezGene=4286 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7105 | |HGNC=7105 | ||
|TSSclassifier=strong | |||
|UniProt=C9J845 | |UniProt=C9J845 | ||
|association_with_transcript=-39bp_to_ENST00000433517_5end | |association_with_transcript=-39bp_to_ENST00000433517_5end | ||
|cluster_id=chr3:69811826..69811835,+ | |||
|description=CAGE_peak_16_at_MITF_5end | |description=CAGE_peak_16_at_MITF_5end | ||
|id=chr3:69811826..69811835,+ | |id=chr3:69811826..69811835,+ | ||
|ontology_enrichment_celltype=CL:1000497!2.20e-11!18;CL:0002518!2.20e-11!18;CL:1000449!2.89e-10!16;CL:0002681!6.27e-10!13;CL:0002584!6.27e-10!13;CL:0002504!3.56e-08!3;CL:1000279!3.56e-08!3;CL:1000280!3.56e-08!3;CL:1000507!4.73e-08!12;CL:1000494!4.73e-08!12;CL:1000612!9.59e-07!7;CL:1000746!9.59e-07!7 | |ontology_enrichment_celltype=CL:1000497!2.20e-11!18;CL:0002518!2.20e-11!18;CL:1000449!2.89e-10!16;CL:0002681!6.27e-10!13;CL:0002584!6.27e-10!13;CL:0002504!3.56e-08!3;CL:1000279!3.56e-08!3;CL:1000280!3.56e-08!3;CL:1000507!4.73e-08!12;CL:1000494!4.73e-08!12;CL:1000612!9.59e-07!7;CL:1000746!9.59e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:1000497;4.82e-19;17!CL:0002518;4.82e-19;17!CL:1000449;1.35e-12;15!CL:1000507;5.92e-09;10!CL:1000494;5.92e-09;10!CL:0002681;1.31e-07;12!CL:0002584;1.31e-07;12 | |ontology_enrichment_celltype_v019=CL:1000497;4.82e-19;17!CL:0002518;4.82e-19;17!CL:1000449;1.35e-12;15!CL:1000507;5.92e-09;10!CL:1000494;5.92e-09;10!CL:0002681;1.31e-07;12!CL:0002584;1.31e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:1000497,4.29e-19,17;CL:0002518,4.29e-19,17;CL:1000449,1.15e-12,15;CL:1000507,5.57e-09,10;CL:1000494,5.57e-09,10;CL:0002681,1.20e-07,12;CL:0002584,1.20e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0005795;7.07e-09;10 | |ontology_enrichment_development_v019=UBERON:0005795;7.07e-09;10 | ||
|ontology_enrichment_disease=DOID:0060084!1.23e-09!3;DOID:127!1.23e-09!3;DOID:0060072!2.71e-07!4 | |ontology_enrichment_disease=DOID:0060084!1.23e-09!3;DOID:127!1.23e-09!3;DOID:0060072!2.71e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:0060084;3.11e-27;3!DOID:127;3.11e-27;3!DOID:0060072;1.04e-20;4!DOID:4468;3.18e-11;2 | |ontology_enrichment_disease_v019=DOID:0060084;3.11e-27;3!DOID:127;3.11e-27;3!DOID:0060072;1.04e-20;4!DOID:4468;3.18e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.82e-27,3;DOID:127,1.82e-27,3;DOID:0060072,7.00e-21,4;DOID:4468,4.09e-11,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002113;1.29e-13;24!UBERON:0011143;1.29e-13;24!UBERON:0006555;1.35e-12;15!UBERON:0004819;1.35e-12;15!UBERON:0001285;1.35e-12;15!UBERON:0007684;1.35e-12;15!UBERON:0000489;2.46e-11;29!UBERON:0006554;5.72e-11;30!UBERON:0001008;5.72e-11;30!UBERON:0004211;5.92e-09;10!UBERON:0009773;5.92e-09;10!UBERON:0001231;5.92e-09;10!UBERON:0004810;5.92e-09;10!UBERON:0001225;1.31e-07;12!UBERON:0008987;1.31e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0002113;1.29e-13;24!UBERON:0011143;1.29e-13;24!UBERON:0006555;1.35e-12;15!UBERON:0004819;1.35e-12;15!UBERON:0001285;1.35e-12;15!UBERON:0007684;1.35e-12;15!UBERON:0000489;2.46e-11;29!UBERON:0006554;5.72e-11;30!UBERON:0001008;5.72e-11;30!UBERON:0004211;5.92e-09;10!UBERON:0009773;5.92e-09;10!UBERON:0001231;5.92e-09;10!UBERON:0004810;5.92e-09;10!UBERON:0001225;1.31e-07;12!UBERON:0008987;1.31e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.15e-12,15;UBERON:0009773,1.15e-12,15;UBERON:0001231,1.15e-12,15;UBERON:0001285,1.15e-12,15;UBERON:0007684,1.15e-12,15;UBERON:0004208,1.15e-12,15;UBERON:0002113,1.24e-12,26;UBERON:0003918,1.24e-12,26;UBERON:0011143,1.24e-12,26;UBERON:0005095,1.24e-12,26;UBERON:0007687,1.24e-12,26;UBERON:0006555,6.49e-12,16;UBERON:0004819,6.49e-12,16;UBERON:0000489,1.18e-10,31;UBERON:0004810,5.57e-09,10;UBERON:0001225,1.20e-07,12;UBERON:0008987,1.20e-07,12;UBERON:0006554,3.94e-07,47;UBERON:0001008,5.47e-07,48 | |||
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| ||
|short_description=p16@MITF | |short_description=p16@MITF | ||
}} | }} |
Latest revision as of 12:07, 19 September 2015
Short description: | p16@MITF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_MITF_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_ENST00000433517_5end |
EntrezGene: | MITF |
HGNC: | 7105 |
UniProt: | C9J845 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 4.29e-19 | 17 |
kidney epithelial cell | 4.29e-19 | 17 |
epithelial cell of nephron | 1.15e-12 | 15 |
kidney tubule cell | 5.57e-09 | 10 |
nephron tubule epithelial cell | 5.57e-09 | 10 |
kidney cortical cell | 1.20e-07 | 12 |
renal cortical epithelial cell | 1.20e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.15e-12 | 15 |
renal tubule | 1.15e-12 | 15 |
nephron tubule | 1.15e-12 | 15 |
nephron | 1.15e-12 | 15 |
uriniferous tubule | 1.15e-12 | 15 |
nephrogenic mesenchyme | 1.15e-12 | 15 |
kidney | 1.24e-12 | 26 |
kidney mesenchyme | 1.24e-12 | 26 |
upper urinary tract | 1.24e-12 | 26 |
kidney rudiment | 1.24e-12 | 26 |
kidney field | 1.24e-12 | 26 |
excretory tube | 6.49e-12 | 16 |
kidney epithelium | 6.49e-12 | 16 |
cavitated compound organ | 1.18e-10 | 31 |
nephron tubule epithelium | 5.57e-09 | 10 |
cortex of kidney | 1.20e-07 | 12 |
renal parenchyma | 1.20e-07 | 12 |
urinary system structure | 3.94e-07 | 47 |
renal system | 5.47e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.82e-27 | 3 |
leiomyoma | 1.82e-27 | 3 |
benign neoplasm | 7.00e-21 | 4 |
clear cell adenocarcinoma | 4.09e-11 | 2 |