FFCP PHASE1:Hg19::chr6:10412477..10412490,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7020 | |EntrezGene=7020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |HGNC=11742 | ||
|TSSclassifier=strong | |||
|UniProt=F8WDC8 | |UniProt=F8WDC8 | ||
|association_with_transcript=-69bp_to_ENST00000489805_5end | |association_with_transcript=-69bp_to_ENST00000489805_5end | ||
|cluster_id=chr6:10412477..10412490,- | |||
|description=CAGE_peak_10_at_TFAP2A_5end | |description=CAGE_peak_10_at_TFAP2A_5end | ||
|id=chr6:10412477..10412490,- | |id=chr6:10412477..10412490,- | ||
|ontology_enrichment_celltype=CL:0000066!2.11e-35!254;CL:0002077!2.04e-11!33;CL:0000076!1.56e-10!62;CL:0000221!1.38e-08!71;CL:0002076!2.75e-08!43;CL:0000075!7.38e-08!27;CL:0002321!8.30e-08!248;CL:0000710!9.69e-08!20;CL:0000220!1.44e-07!246;CL:0000077!2.10e-07!19;CL:0000333!5.53e-07!41;CL:0000148!8.96e-07!10;CL:0000541!8.96e-07!10 | |ontology_enrichment_celltype=CL:0000066!2.11e-35!254;CL:0002077!2.04e-11!33;CL:0000076!1.56e-10!62;CL:0000221!1.38e-08!71;CL:0002076!2.75e-08!43;CL:0000075!7.38e-08!27;CL:0002321!8.30e-08!248;CL:0000710!9.69e-08!20;CL:0000220!1.44e-07!246;CL:0000077!2.10e-07!19;CL:0000333!5.53e-07!41;CL:0000148!8.96e-07!10;CL:0000541!8.96e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.23e-15;19!CL:0000148;2.72e-09;10!CL:0000710;3.87e-09;20!CL:0002077;7.52e-08;34!CL:0000075;1.78e-07;27!CL:0000076;5.09e-07;63!CL:0002567;9.96e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.11e-27,253;CL:0000077,1.08e-15,19;CL:0000076,6.17e-15,63;CL:0000148,2.50e-09,10;CL:0000541,2.50e-09,10;CL:0000710,3.79e-09,20;CL:0002077,1.42e-08,34;CL:0000333,2.48e-08,41;CL:0000133,1.18e-07,59;CL:0000075,1.75e-07,27;CL:0002567,8.08e-07,3;CL:0000221,9.83e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.10e-31!143;DOID:162!4.13e-26!235;DOID:14566!3.25e-25!239;DOID:305!6.58e-25!106;DOID:1749!1.21e-08!14 | |ontology_enrichment_disease=DOID:0050687!1.10e-31!143;DOID:162!4.13e-26!235;DOID:14566!3.25e-25!239;DOID:305!6.58e-25!106;DOID:1749!1.21e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.03e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,8.92e-27,143;DOID:162,1.26e-22,235;DOID:305,6.03e-22,106;DOID:14566,9.69e-22,239;DOID:1749,1.23e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!3.79e-08!72;UBERON:0004119!1.27e-07!169;UBERON:0000925!1.27e-07!169;UBERON:0006595!1.27e-07!169;UBERON:0001737!4.88e-07!9;UBERON:0001003!8.24e-07!14;UBERON:0007376!8.24e-07!14;UBERON:0007383!8.24e-07!14 | |ontology_enrichment_uberon=UBERON:0001004!3.79e-08!72;UBERON:0004119!1.27e-07!169;UBERON:0000925!1.27e-07!169;UBERON:0006595!1.27e-07!169;UBERON:0001737!4.88e-07!9;UBERON:0001003!8.24e-07!14;UBERON:0007376!8.24e-07!14;UBERON:0007383!8.24e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.07e-08;9!UBERON:0001557;1.07e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.33e-09,9;UBERON:0001004,3.92e-08,74 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.655324116390517,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0.825354125820202,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,1.58891016975863,0,0,0,0,0.74000264525148,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0.831192346452549,0,0,0,0,0,0,0,0.600182192168805,0,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0,0.484938170456436,0,0,0.847802961552438,1.15956511897978,1.09098448236334,2.00763216772303,0.121973706129595,0.132529768321485,0.232387885739037,0.414644220061482,0,0,0,1.92972281457866,1.38134921352481,0,0,2.72105640091641,2.02301628093722,1.92808823906786,1.32352767278873,1.74303555273925,0.71181185733329,1.75280700608214,0.196221465125346,2.30848294167834,0,0,0,0,0,0,0,0,0,0,0.329250856225877,1.1240175325762,0.502644862058154,0.925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.708875486211932,0.716468181622786,0.871901815541886,0,0,0,0,0,0,6.1592957463404,6.49380323449072,10.5495702489042,1.71072446022705,3.18765227380303,2.40274446275134,7.71731368102561,0.224262168690721,0,0.07333828582095,0.258543431515556,0,0,1.32969058292435,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87173775377726,0.892144943985809,1.10391690523754,1.7571212248907,0,0,0,0,0,0.781952530212746,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.644566922551274,0.114814448164607,0,0,0.451199612907412,0.616122696835318,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0.671624264166535,0,0,0,0,0,1.54561517471583,0,0.165018999841176,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,1.98341898433174,2.88285101047659,1.27612712494584,1.31505115112215,0,0,0.6970372701606,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0.75894634753143,0.349934720244983,1.15466535270614,0,0,1.7887322147588,0.43050537267123,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0.320472213382419,0,3.18552280775341,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963528450622197,0.201799707191048,0,0,0,0,0,0,0,0,0,0,2.81974010175699,0.561421621224659,0,0,0.111443384277478,0,0.47748896947538,0,0,0,0,2.33748280548102,0.16480387422676,0,0,0,1.76352923497993,0.715880777515084,0,0.311039587661807,0.808815160325942,0,0,0,0,0,0,0,0,0.7812832832557,1.66173999992772,0,0.1137934482855,0.508507300585533,1.89110145414349,0.344743373241465,0,0.520874984799877,0,0,0,0.110579259931225,0.295547618953547,0,1.63407695278485,0.139423744278603,0.307801034015188,0.569710279235006,0,0,0.108647371922008,1.27600463892768,0.732780747214898,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,1.26598838716816,0,0,0,0,0,0,0.296521128680622,0.617819694732514,0.104421949505455,0,0,0,0,0.586993856796269,0.971121518136371,0,0,0,0,0.60129367765797,0.829505531177977,1.32930774541437,4.96487933813248,1.2557316736289,3.58417289318877,0.853828638089378,2.35746944122336,0,1.56787835863004,2.61177619741208,0.52418000472609,0.171986032471617,2.70917727609438,5.99332400106722,2.6276946257027,0.193978032976839,0,0.677942222341597,0,0.794858446811959,0,0.586654148204409,2.96587634930675,0.213452994739353,5.39485945871752,0.432271251462318,0,0,0.14405479798815,0,0.707082103850386,1.63085047288337,1.46443984837266,4.89591444654345,0.866851769704557,0,0,0,0.859530882839914,0.525774708558629,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,1.67717343799633,0.157611414598396,0.262272940674991,2.00640639386872,1.6135860539956,1.91915197319445,0,0,0,0,0,0,4.7892076624995,0,0.170388021785422,18.6964951008207,0,0,0.258565912723101,0,0.855434189421647,0,0,0,0,0.496166021811951,0.592834895693833,0,1.27668251554036,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,2.87454938312845,2.72968411574966,4.85291067026445,0.470531639396343,3.27834434064817,3.76794674388145,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,2.52369796457302,2.11881813448034,3.64550705337374,2.87093721161733,4.0807066592209,1.85217979459067,5.62894420364875,1.61179956973339,0,1.97355644620836,1.23682402162117,2.89371057406372,2.36519416914302,1.02496607435179,1.72715170865599,2.12701969324168,0,0,0,0,7.8626363723139,3.93236654005951,0.42262424671725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| ||
|short_description=p10@TFAP2A | |short_description=p10@TFAP2A | ||
}} | }} |
Latest revision as of 12:48, 19 September 2015
Short description: | p10@TFAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TFAP2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -69bp_to_ENST00000489805_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | F8WDC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.11e-27 | 253 |
mesothelial cell | 1.08e-15 | 19 |
squamous epithelial cell | 6.17e-15 | 63 |
melanocyte | 2.50e-09 | 10 |
melanoblast | 2.50e-09 | 10 |
neurecto-epithelial cell | 3.79e-09 | 20 |
ecto-epithelial cell | 1.42e-08 | 34 |
migratory neural crest cell | 2.48e-08 | 41 |
neurectodermal cell | 1.18e-07 | 59 |
columnar/cuboidal epithelial cell | 1.75e-07 | 27 |
light melanocyte | 8.08e-07 | 3 |
ectodermal cell | 9.83e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.33e-09 | 9 |
respiratory system | 3.92e-08 | 74 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 8.92e-27 | 143 |
cancer | 1.26e-22 | 235 |
carcinoma | 6.03e-22 | 106 |
disease of cellular proliferation | 9.69e-22 | 239 |
squamous cell carcinoma | 1.23e-11 | 14 |