FFCP PHASE1:Hg19::chr8:95653861..95653872,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54845 | |EntrezGene=54845 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25966 | |HGNC=25966 | ||
|TSSclassifier=strong | |||
|UniProt=E5RGE9 | |UniProt=E5RGE9 | ||
|association_with_transcript=21bp_to_ENST00000520385_5end | |association_with_transcript=21bp_to_ENST00000520385_5end | ||
|cluster_id=chr8:95653861..95653872,+ | |||
|description=CAGE_peak_10_at_ESRP1_5end | |description=CAGE_peak_10_at_ESRP1_5end | ||
|id=chr8:95653861..95653872,+ | |id=chr8:95653861..95653872,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.18e-20!254;CL:0002076!1.61e-19!43;CL:0000223!2.47e-15!59;CL:0000039!3.00e-15!7;CL:0000586!3.00e-15!7;CL:0002251!9.55e-09!21;CL:0002368!4.00e-08!13 | |ontology_enrichment_celltype=CL:0000066!8.18e-20!254;CL:0002076!1.61e-19!43;CL:0000223!2.47e-15!59;CL:0000039!3.00e-15!7;CL:0000586!3.00e-15!7;CL:0002251!9.55e-09!21;CL:0002368!4.00e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0002178;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,7.76e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.88e-21;1 | |||
|ontology_enrichment_disease=DOID:305!2.61e-24!106;DOID:0050687!1.07e-20!143;DOID:1749!5.74e-17!14;DOID:162!3.40e-11!235;DOID:5093!5.65e-11!4;DOID:1612!5.65e-11!4;DOID:299!8.55e-11!25;DOID:14566!1.06e-10!239 | |ontology_enrichment_disease=DOID:305!2.61e-24!106;DOID:0050687!1.07e-20!143;DOID:1749!5.74e-17!14;DOID:162!3.40e-11!235;DOID:5093!5.65e-11!4;DOID:1612!5.65e-11!4;DOID:299!8.55e-11!25;DOID:14566!1.06e-10!239 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.57e-79;4!DOID:1612;1.57e-79;4!DOID:299;4.28e-13;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.74e-79,4;DOID:1612,1.74e-79,4;DOID:299,4.42e-13,25;DOID:305,5.67e-09,106;DOID:7,1.46e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.55e-12!169;UBERON:0000925!1.55e-12!169;UBERON:0006595!1.55e-12!169;UBERON:0000344!7.27e-11!12;UBERON:0001007!3.48e-10!155;UBERON:0001555!3.48e-10!155;UBERON:0007026!3.48e-10!155;UBERON:0005153!6.60e-10!37;UBERON:0005156!1.73e-09!59;UBERON:0000990!1.73e-09!59;UBERON:0001004!2.47e-09!72;UBERON:0003135!3.04e-09!11;UBERON:0005911!5.62e-09!82;UBERON:0003133!5.64e-09!48;UBERON:0004921!3.95e-08!129;UBERON:0004185!3.95e-08!129;UBERON:0003101!5.89e-08!22;UBERON:0000079!5.89e-08!22;UBERON:0000915!1.94e-07!52;UBERON:0003729!3.19e-07!5;UBERON:0000065!4.48e-07!53;UBERON:0005178!7.99e-07!34;UBERON:0002224!7.99e-07!34 | |ontology_enrichment_uberon=UBERON:0004119!1.55e-12!169;UBERON:0000925!1.55e-12!169;UBERON:0006595!1.55e-12!169;UBERON:0000344!7.27e-11!12;UBERON:0001007!3.48e-10!155;UBERON:0001555!3.48e-10!155;UBERON:0007026!3.48e-10!155;UBERON:0005153!6.60e-10!37;UBERON:0005156!1.73e-09!59;UBERON:0000990!1.73e-09!59;UBERON:0001004!2.47e-09!72;UBERON:0003135!3.04e-09!11;UBERON:0005911!5.62e-09!82;UBERON:0003133!5.64e-09!48;UBERON:0004921!3.95e-08!129;UBERON:0004185!3.95e-08!129;UBERON:0003101!5.89e-08!22;UBERON:0000079!5.89e-08!22;UBERON:0000915!1.94e-07!52;UBERON:0003729!3.19e-07!5;UBERON:0000065!4.48e-07!53;UBERON:0005178!7.99e-07!34;UBERON:0002224!7.99e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;3.26e-32;10!UBERON:0001443;2.45e-29;11!UBERON:0002171;5.71e-21;1!UBERON:0006518;5.71e-21;1!UBERON:0008949;5.71e-21;1!UBERON:0000101;5.71e-21;1!UBERON:0002167;5.71e-21;1!UBERON:0000915;1.98e-12;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,3.39e-32,10;UBERON:0001443,2.54e-29,11;UBERON:0002171,3.45e-21,1;UBERON:0006518,3.45e-21,1;UBERON:0008949,3.45e-21,1;UBERON:0000101,3.45e-21,1;UBERON:0002167,3.45e-21,1;UBERON:0000915,9.85e-14,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0.243947412259191,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,0.109750285408626,1.1240175325762,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,2.37061319387782,3.43394464837949,0,0,0,0,0.16798212819886,0.425325291727159,0.53735113621709,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.576570202095319,0,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0.359473404589307,0.358042349351218,0,0,0,0,0,0,0,1.30213880542617,3.06109999986685,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0.69169171316418,0.269272933229316,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.520679215005393,0.391969589657511,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,1.15272333723285,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,1.65695622138878,0,0,0,3.83004754662109,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.419638523158333,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0.366857197043358,0.462102664601353,0,0,0,0,0,0,0.261906694481422,0,0.295712172434091,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0.883352102537187,0,0,0,0,0,0.233939463462106,0,0,1.35535298446752,0,0.150962843566674,0.0771741581079447,0,0,0,0.707029641304878,0,0,0,0,0,0,0,0.178553938605658,0,0.641930933513346,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0.534434810531121,0.459474497674225,0.250707539292375,0,0,0,0,0,0,0,0,0,0.318235791390825,0,0,0,0,0.215166616178029,0,0.488419611665847,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0.243947412259191,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,0.109750285408626,1.1240175325762,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,2.37061319387782,3.43394464837949,0,0,0,0,0.16798212819886,0.425325291727159,0.53735113621709,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.576570202095319,0,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0.359473404589307,0.358042349351218,0,0,0,0,0,0,0,1.30213880542617,3.06109999986685,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0.69169171316418,0.269272933229316,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.520679215005393,0.391969589657511,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,1.15272333723285,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,1.65695622138878,0,0,0,3.83004754662109,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.419638523158333,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0.366857197043358,0.462102664601353,0,0,0,0,0,0,0.261906694481422,0,0.295712172434091,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0.883352102537187,0,0,0,0,0,0.233939463462106,0,0,1.35535298446752,0,0.150962843566674,0.0771741581079447,0,0,0,0.707029641304878,0,0,0,0,0,0,0,0.178553938605658,0,0.641930933513346,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0.534434810531121,0.459474497674225,0.250707539292375,0,0,0,0,0,0,0,0,0,0.318235791390825,0,0,0,0,0.215166616178029,0,0.488419611665847,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p10@ESRP1 | |short_description=p10@ESRP1 | ||
}} | }} |
Latest revision as of 13:09, 19 September 2015
Short description: | p10@ESRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ESRP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000520385_5end |
EntrezGene: | ESRP1 |
HGNC: | 25966 |
UniProt: | E5RGE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 3.39e-32 | 10 |
chest | 2.54e-29 | 11 |
lower lobe of right lung | 3.45e-21 | 1 |
right lung lobe | 3.45e-21 | 1 |
lower lobe of lung | 3.45e-21 | 1 |
lobe of lung | 3.45e-21 | 1 |
right lung | 3.45e-21 | 1 |
thoracic segment of trunk | 9.85e-14 | 52 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.74e-79 | 4 |
breast cancer | 1.74e-79 | 4 |
adenocarcinoma | 4.42e-13 | 25 |
carcinoma | 5.67e-09 | 106 |
disease of anatomical entity | 1.46e-08 | 39 |