FFCP PHASE1:Hg19::chr15:85429918..85429922,+: Difference between revisions
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|id=chr15:85429918..85429922,+
|short_description=p6@SLC28A1
|description=CAGE_peak_6_at_SLC28A1_5end
|association_with_transcript=0bp_to_BC126204,BC126206,BC143908...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9154 | |EntrezGene=9154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11001 | |HGNC=11001 | ||
|TSSclassifier=strong | |||
|UniProt=O00337 | |UniProt=O00337 | ||
|association_with_transcript=0bp_to_BC126204,BC126206,BC143908_5end | |||
|cluster_id=chr15:85429918..85429922,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_6_at_SLC28A1_5end | |||
|id=chr15:85429918..85429922,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.34e-08;10!UBERON:0007687;6.34e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!2.06e-15!1;UBERON:0000160!7.04e-13!27;UBERON:0000059!2.13e-12!11;UBERON:0005172!4.18e-12!55;UBERON:0005173!4.18e-12!55;UBERON:0002417!7.26e-11!61;UBERON:0000916!7.26e-11!61;UBERON:0005409!5.17e-10!35;UBERON:0002113!9.31e-09!27;UBERON:0003918!9.31e-09!27;UBERON:0005095!9.31e-09!27;UBERON:0007687!9.31e-09!27;UBERON:0000489!2.02e-07!32;UBERON:0001155!2.52e-07!9;UBERON:0002107!3.36e-07!19;UBERON:0006925!3.36e-07!19;UBERON:0008836!3.36e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;8.72e-16;17!UBERON:0002108;1.40e-14;4!UBERON:0005409;1.29e-12;22!UBERON:0001155;1.16e-08;9!UBERON:0004921;1.23e-08;33!UBERON:0000059;2.55e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.05e-16,17;UBERON:0002108,1.40e-14,4;UBERON:0005409,2.77e-11,25;UBERON:0001155,1.21e-08,9;UBERON:0000059,2.63e-07,11 | |||
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|short_description=p6@SLC28A1 | |||
}} | }} |
Latest revision as of 13:17, 19 September 2015
Short description: | p6@SLC28A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC28A1_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_BC126204, BC126206, BC143908_5end |
EntrezGene: | SLC28A1 |
HGNC: | 11001 |
UniProt: | O00337 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 9.05e-16 | 17 |
small intestine | 1.40e-14 | 4 |
gastrointestinal system | 2.77e-11 | 25 |
colon | 1.21e-08 | 9 |
large intestine | 2.63e-07 | 11 |