FFCP PHASE1:Hg19::chr15:85524699..85524722,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:85524699..85524722,+ to FFCP PHASE1:Hg19::chr15:85524699..85524722,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5151 | |EntrezGene=5151 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8793 | |HGNC=8793 | ||
|TSSclassifier=strong | |||
|UniProt=O60658 | |UniProt=O60658 | ||
|association_with_transcript=-482bp_to_ENST00000394553,NM_002605,NM_173454,uc002blh.2,uc002bli.2,uc002blj.2,uc010bnc.2,uc010bnd.2_5end | |||
|cluster_id=chr15:85524699..85524722,+ | |||
|description=CAGE_peak_6_at_PDE8A_5end | |||
|id=chr15:85524699..85524722,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.00e-07,9;CL:0002397,1.00e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.63e-12!82;UBERON:0005743!1.66e-11!86;UBERON:0000073!3.15e-11!94;UBERON:0001016!3.15e-11!94;UBERON:0001049!4.95e-11!57;UBERON:0005068!4.95e-11!57;UBERON:0006241!4.95e-11!57;UBERON:0007135!4.95e-11!57;UBERON:0000955!1.58e-10!69;UBERON:0006238!1.58e-10!69;UBERON:0002616!2.07e-10!59;UBERON:0002346!8.64e-10!90;UBERON:0003075!2.06e-09!86;UBERON:0007284!2.06e-09!86;UBERON:0003056!1.14e-08!61;UBERON:0000033!1.40e-08!123;UBERON:0003080!1.67e-08!42;UBERON:0002780!3.64e-08!41;UBERON:0001890!3.64e-08!41;UBERON:0006240!3.64e-08!41;UBERON:0000153!4.11e-08!129;UBERON:0007811!4.11e-08!129;UBERON:0001893!1.26e-07!34;UBERON:0002020!2.05e-07!34;UBERON:0003528!2.05e-07!34;UBERON:0002791!4.14e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;2.80e-08;9!UBERON:0002308;2.80e-08;9!UBERON:0005162;7.67e-08;2!UBERON:0000122;7.67e-08;2!UBERON:0001897;2.18e-07;2!UBERON:0010225;2.18e-07;2!UBERON:0009663;3.46e-07;7!UBERON:0002780;3.85e-07;41!UBERON:0001890;3.85e-07;41!UBERON:0001893;4.61e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.56e-11,56;UBERON:0005068,3.56e-11,56;UBERON:0006241,3.56e-11,56;UBERON:0007135,3.56e-11,56;UBERON:0000955,6.90e-11,68;UBERON:0006238,6.90e-11,68;UBERON:0001017,1.18e-10,81;UBERON:0000073,1.56e-10,53;UBERON:0002616,1.56e-10,53;UBERON:0001016,2.75e-10,89;UBERON:0003075,1.85e-09,82;UBERON:0007284,1.85e-09,82;UBERON:0002780,2.99e-09,41;UBERON:0001890,2.99e-09,41;UBERON:0003080,2.99e-09,41;UBERON:0006240,2.99e-09,41;UBERON:0002346,8.34e-09,86;UBERON:0003056,1.50e-08,61;UBERON:0000125,2.79e-08,9;UBERON:0002308,2.79e-08,9;UBERON:0001893,4.88e-08,34;UBERON:0005162,7.36e-08,2;UBERON:0000122,7.36e-08,2;UBERON:0001897,1.05e-07,2;UBERON:0010225,1.05e-07,2;UBERON:0011216,1.81e-07,223;UBERON:0010371,2.11e-07,104;UBERON:0007023,2.12e-07,114;UBERON:0009663,3.59e-07,7 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0.975865597581014,0.123121058076788,0.612002073732759,0.313454721478088,0.286235987131057,0.547497700291537,0.251085279189606,0.458480434487708,0.738905305049512,0.472264687882075,0.786728553697808,0,0.309632246632152,0,0.30120591877825,1.10926203050036,0.0774672005803016,0.142169232487422,0,1.10799081706375,0.802177789880567,0.868043482863407,0,0,0,0.145398238779565,0.377875943688809,0.727752183563449,0.232429036905685,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0,0,0.320929027076094,0.639337125799041,0,0.398927315243264,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0.316462387440884,1.05627643155971,0.637812899895131,1.04829322754188,0.561643155732475,0,0.32145117339416,1.42506371870624,1.39241674039363,0.182664153764634,0,0.546138611262131,0.889509253863555,0.853460445133014,0,0.574752439954483,0,0.954053754535364,0.569212969109448,1.17447437874188,0,0,0,0,0.590129310341499,1.17903228824749,0.205601498999509,0,0.32592226663359,0,1.94826728407911,0.111410456885174,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0.296573126324121,0.267540828089713,0,0.113309342697566,0.766440987203842,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.604820229674197,0.267440195783507,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0.973269740605272,0.189069634328136,0.221729397462564,0.43917392846563,0.72038491523742,0.728590576585084,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.550236083880135,0.208994966536811,0.516833518338658,0.35576626268671,0.33472061276467,0,0.760272105718513,1.46437234528902,0,0,0.446498641420399,0.44905874525234,0.450445921933289,1.53316637465883,0,0.183201743930407,0,0,0,0,0.379891534993739,0,0.286836620748814,0.354668382198357,0,1.06748995729705,0.49333509683432,0,0.67355336034844,0.490385709340376,1.21085942115945,0,0,0.312160076830321,0,0.298897361103602,0.23486899728753,0.485618833104395,0.702254033511242,0,0,0.103325781175765,0,1.48360157567134,0,0.718618141816238,0.336672227908132,0.125118519871964,0.277064115484183,0.438977620880838,0,0.45071417671979,0.340296549480063,0.358779271377724,0.427114777637135,0.211931901159562,0,0.412210116953756,0.515281080091258,0,0.506328996723799,0.389748020644795,0.504867548488229,0.276149695926898,0.161646056818812,0,0,0.169560592310488,0.386521706326594,0.818238361772504,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0.653638332277218,0,0,0.392442930250692,0.769494313892781,0,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0.514703430895577,0.109750285408626,0,0.201057944823262,0.0925884451585296,0.977424915930974,1.03993478527958,0,0.579652024875384,0.587043471179108,0.866198686566443,0,0.190254152234598,0,0,0,0,0.445893486866185,0,0,0.141775097242386,0.179117045405697,0,0.383382679165211,0,0.792435906119034,0.621984346622316,0.432359860250884,0.12624243342638,0.888970520090367,1.14596527667483,0,0,0.411309970813294,0,0,1.00917975910825,0.43596006883328,0.51336800074665,0,0,0.845302752556,0,0,0,0,0,0.57191197463259,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,0,0,0,0,0,0.591092280605782,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0.713715955188647,0.315404830067869,0.234282829985426,0,0,1.03473071292505,0,0.368738337083406,0.0868836144680828,0,0.343143423810856,0.620304078368662,0.431428401637234,0.320182673410333,0.606255142892519,0,0,0,0.460385919864187,0.561320188866147,0.128139149255701,0,0,0,0.154209693802656,0.355123450626254,0.164254312027618,1.03850885836724,0,0,0,0.0920809889358963,0.114814448164607,0.546273504020151,0.131124414959424,0,0.15403067420883,0.784349769176855,0,0.422206515571503,0,0.340187410553031,0.431831832204279,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.515205058238611,0.183138929636687,0.330037999682352,0,0,0,0.48335359146061,0.462145851343933,0.307007349452259,0.137836572484531,0.214840489736547,0,0.426133137080504,0.267096106940212,0,0.384380134730212,0.893288987462089,0.10115778085555,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0,0.286249773483982,0.744316738719335,0.316379424718726,0.571890581771475,0,0.42793898803392,0,0.78494864019923,0.719489830333259,0.54907405947211,0.471249609382746,0,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,0,0,0.551365343546124,0,0.438450885253763,0,0.655894752046633,0,0,0,0.143411352204052,0.294747123039363,0,0,0.211107635297664,0.329294892959902,1.13841952129715,0.349934720244983,0.192444225451024,0,1.08890984861323,0.564862804660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|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0.975865597581014,0.123121058076788,0.612002073732759,0.313454721478088,0.286235987131057,0.547497700291537,0.251085279189606,0.458480434487708,0.738905305049512,0.472264687882075,0.786728553697808,0,0.309632246632152,0,0.30120591877825,1.10926203050036,0.0774672005803016,0.142169232487422,0,1.10799081706375,0.802177789880567,0.868043482863407,0,0,0,0.145398238779565,0.377875943688809,0.727752183563449,0.232429036905685,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0,0,0.320929027076094,0.639337125799041,0,0.398927315243264,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0.316462387440884,1.05627643155971,0.637812899895131,1.04829322754188,0.561643155732475,0,0.32145117339416,1.42506371870624,1.39241674039363,0.182664153764634,0,0.546138611262131,0.889509253863555,0.853460445133014,0,0.574752439954483,0,0.954053754535364,0.569212969109448,1.17447437874188,0,0,0,0,0.590129310341499,1.17903228824749,0.205601498999509,0,0.32592226663359,0,1.94826728407911,0.111410456885174,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0.296573126324121,0.267540828089713,0,0.113309342697566,0.766440987203842,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.604820229674197,0.267440195783507,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0.973269740605272,0.189069634328136,0.221729397462564,0.43917392846563,0.72038491523742,0.728590576585084,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.550236083880135,0.208994966536811,0.516833518338658,0.35576626268671,0.33472061276467,0,0.760272105718513,1.46437234528902,0,0,0.446498641420399,0.44905874525234,0.450445921933289,1.53316637465883,0,0.183201743930407,0,0,0,0,0.379891534993739,0,0.286836620748814,0.354668382198357,0,1.06748995729705,0.49333509683432,0,0.67355336034844,0.490385709340376,1.21085942115945,0,0,0.312160076830321,0,0.298897361103602,0.23486899728753,0.485618833104395,0.702254033511242,0,0,0.103325781175765,0,1.48360157567134,0,0.718618141816238,0.336672227908132,0.125118519871964,0.277064115484183,0.438977620880838,0,0.45071417671979,0.340296549480063,0.358779271377724,0.427114777637135,0.211931901159562,0,0.412210116953756,0.515281080091258,0,0.506328996723799,0.389748020644795,0.504867548488229,0.276149695926898,0.161646056818812,0,0,0.169560592310488,0.386521706326594,0.818238361772504,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0.653638332277218,0,0,0.392442930250692,0.769494313892781,0,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0.514703430895577,0.109750285408626,0,0.201057944823262,0.0925884451585296,0.977424915930974,1.03993478527958,0,0.579652024875384,0.587043471179108,0.866198686566443,0,0.190254152234598,0,0,0,0,0.445893486866185,0,0,0.141775097242386,0.179117045405697,0,0.383382679165211,0,0.792435906119034,0.621984346622316,0.432359860250884,0.12624243342638,0.888970520090367,1.14596527667483,0,0,0.411309970813294,0,0,1.00917975910825,0.43596006883328,0.51336800074665,0,0,0.845302752556,0,0,0,0,0,0.57191197463259,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,0,0,0,0,0,0.591092280605782,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0.713715955188647,0.315404830067869,0.234282829985426,0,0,1.03473071292505,0,0.368738337083406,0.0868836144680828,0,0.343143423810856,0.620304078368662,0.431428401637234,0.320182673410333,0.606255142892519,0,0,0,0.460385919864187,0.561320188866147,0.128139149255701,0,0,0,0.154209693802656,0.355123450626254,0.164254312027618,1.03850885836724,0,0,0,0.0920809889358963,0.114814448164607,0.546273504020151,0.131124414959424,0,0.15403067420883,0.784349769176855,0,0.422206515571503,0,0.340187410553031,0.431831832204279,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.515205058238611,0.183138929636687,0.330037999682352,0,0,0,0.48335359146061,0.462145851343933,0.307007349452259,0.137836572484531,0.214840489736547,0,0.426133137080504,0.267096106940212,0,0.384380134730212,0.893288987462089,0.10115778085555,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0,0.286249773483982,0.744316738719335,0.316379424718726,0.571890581771475,0,0.42793898803392,0,0.78494864019923,0.719489830333259,0.54907405947211,0.471249609382746,0,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,0,0,0.551365343546124,0,0.438450885253763,0,0.655894752046633,0,0,0,0.143411352204052,0.294747123039363,0,0,0.211107635297664,0.329294892959902,1.13841952129715,0.349934720244983,0.192444225451024,0,1.08890984861323,0.564862804660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| ||
|short_description=p6@PDE8A | |||
}} | }} |
Latest revision as of 13:22, 19 September 2015
Short description: | p6@PDE8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PDE8A_5end |
Coexpression cluster: | NA |
Association with transcript: | -482bp_to_ENST00000394553, NM_002605, NM_173454, uc002blh.2, uc002bli.2, uc002blj.2, uc010bnc.2, uc010bnd.2_5end |
EntrezGene: | PDE8A |
HGNC: | 8793 |
UniProt: | O60658 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 1.00e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.00e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.56e-11 | 56 |
neural rod | 3.56e-11 | 56 |
future spinal cord | 3.56e-11 | 56 |
neural keel | 3.56e-11 | 56 |
brain | 6.90e-11 | 68 |
future brain | 6.90e-11 | 68 |
central nervous system | 1.18e-10 | 81 |
regional part of nervous system | 1.56e-10 | 53 |
regional part of brain | 1.56e-10 | 53 |
nervous system | 2.75e-10 | 89 |
neural plate | 1.85e-09 | 82 |
presumptive neural plate | 1.85e-09 | 82 |
regional part of forebrain | 2.99e-09 | 41 |
forebrain | 2.99e-09 | 41 |
anterior neural tube | 2.99e-09 | 41 |
future forebrain | 2.99e-09 | 41 |
neurectoderm | 8.34e-09 | 86 |
pre-chordal neural plate | 1.50e-08 | 61 |
neural nucleus | 2.79e-08 | 9 |
nucleus of brain | 2.79e-08 | 9 |
telencephalon | 4.88e-08 | 34 |
multi cell component structure | 7.36e-08 | 2 |
neuron projection bundle | 7.36e-08 | 2 |
dorsal plus ventral thalamus | 1.05e-07 | 2 |
thalamic complex | 1.05e-07 | 2 |
organ system subdivision | 1.81e-07 | 223 |
ecto-epithelium | 2.11e-07 | 104 |
adult organism | 2.12e-07 | 114 |
telencephalic nucleus | 3.59e-07 | 7 |