FFCP PHASE2:Hg19::chr19:51512869..51512885,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:284366 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6370 |TSScla...") |
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| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=284366 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6370 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9UKQ9,Q6QA55,Q2XQG6 | ||
|association_with_transcript=4bp_to_ENST00000250366,ENST00000544410,NM_012315,uc002puw.1,uc002pux.1,uc010eol.1_5end | |association_with_transcript=4bp_to_ENST00000250366,ENST00000544410,NM_012315,uc002puw.1,uc002pux.1,uc010eol.1_5end | ||
|cluster_id=chr19:51512869..51512885,- | |cluster_id=chr19:51512869..51512885,- | ||
Latest revision as of 13:44, 19 September 2015
| Short description: | p3@KLK9 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_KLK9_5end |
| Coexpression cluster: | C3815_epidermoid_oral_tongue_Corneal_Prostate_nasal_Keratinocyte |
| Association with transcript: | 4bp_to_ENST00000250366, ENST00000544410, NM_012315, uc002puw.1, uc002pux.1, uc010eol.1_5end |
| EntrezGene: | KLK9 |
| HGNC: | 6370 |
| UniProt: | Q9UKQ9Q6QA55Q2XQG6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@KLK9 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell of alimentary canal | 7.62e-28 | 20 |
| gingival epithelial cell | 3.87e-27 | 3 |
| general ecto-epithelial cell | 5.91e-23 | 14 |
| corneal epithelial cell | 1.13e-19 | 2 |
| endo-epithelial cell | 3.52e-16 | 42 |
| ecto-epithelial cell | 3.92e-16 | 34 |
| squamous epithelial cell | 6.61e-16 | 63 |
| stratified squamous epithelial cell | 3.94e-14 | 6 |
| keratin accumulating cell | 3.94e-14 | 6 |
| stratified epithelial cell | 3.94e-14 | 6 |
Showing 1 to 10 of 27 entries
| Ontology term | p-value | n |
|---|---|---|
| mouth mucosa | 2.42e-33 | 13 |
| gingival epithelium | 3.87e-27 | 3 |
| mucosa of oral region | 1.53e-21 | 4 |
| respiratory system mucosa | 1.53e-21 | 4 |
| mucosa | 1.85e-21 | 20 |
| surface structure | 9.39e-21 | 99 |
| oral opening | 1.74e-19 | 22 |
| mouth | 5.53e-19 | 29 |
| stomodeum | 5.53e-19 | 29 |
| head | 6.50e-18 | 56 |
Showing 1 to 10 of 29 entries
| Ontology term | p-value | n |
|---|---|---|
| squamous cell carcinoma | 1.36e-16 | 14 |
| skin squamous cell carcinoma | 4.75e-10 | 1 |
| keratoacanthoma | 4.75e-10 | 1 |
Showing 1 to 3 of 3 entries
