FFCP PHASE1:Hg19::chr2:202719443..202719522,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65061 | |EntrezGene=65061 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14434 | |HGNC=14434 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000460149,ENST00000466337,uc002uyu.1_5end | |association_with_transcript=0bp_to_ENST00000460149,ENST00000466337,uc002uyu.1_5end | ||
|cluster_id=chr2:202719443..202719522,+ | |||
|description=CAGE_peak_1_at_CDK15_5end | |description=CAGE_peak_1_at_CDK15_5end | ||
|id=chr2:202719443..202719522,+ | |id=chr2:202719443..202719522,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.38e-33!180;CL:0000057!1.45e-22!75;CL:0002620!8.14e-19!23;CL:0002371!4.64e-15!591;CL:0000548!4.11e-14!679;CL:0000004!4.11e-14!679;CL:0000255!4.11e-14!679;CL:0000012!9.46e-14!682;CL:0000144!6.40e-13!625;CL:0000003!1.24e-09!722;CL:0000035!1.28e-07!20;CL:0000062!1.66e-07!11;CL:0000375!1.66e-07!11;CL:0000335!1.66e-07!11;CL:0002556!6.52e-07!6;CL:0000188!8.91e-07!9 | |ontology_enrichment_celltype=CL:0000055!7.38e-33!180;CL:0000057!1.45e-22!75;CL:0002620!8.14e-19!23;CL:0002371!4.64e-15!591;CL:0000548!4.11e-14!679;CL:0000004!4.11e-14!679;CL:0000255!4.11e-14!679;CL:0000012!9.46e-14!682;CL:0000144!6.40e-13!625;CL:0000003!1.24e-09!722;CL:0000035!1.28e-07!20;CL:0000062!1.66e-07!11;CL:0000375!1.66e-07!11;CL:0000335!1.66e-07!11;CL:0002556!6.52e-07!6;CL:0000188!8.91e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.30e-19;23!CL:0000062;7.08e-09;9!CL:0000057;6.84e-08;73!CL:0002552;1.70e-07;5!CL:0002556;1.89e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.22e-19,23;CL:0000057,7.02e-16,76;CL:0000062,5.14e-09,11;CL:0000375,5.14e-09,11;CL:0000335,5.14e-09,11;CL:0002552,1.76e-07,5;CL:0002556,1.93e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000335;5.30e-09;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;7.72e-08;5!DOID:450;7.72e-08;5!DOID:66;7.72e-08;5!DOID:423;7.72e-08;5!DOID:0080000;7.72e-08;5!DOID:11722;7.72e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.06e-08,5;DOID:450,6.06e-08,5;DOID:66,6.06e-08,5;DOID:423,6.06e-08,5;DOID:0080000,6.06e-08,5;DOID:11722,6.06e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!7.39e-17!95;UBERON:0002097!1.23e-16!40;UBERON:0002199!1.58e-15!45;UBERON:0002416!1.58e-15!45;UBERON:0000914!2.30e-14!83;UBERON:0002329!2.30e-14!83;UBERON:0003077!2.30e-14!83;UBERON:0003059!2.30e-14!83;UBERON:0007282!2.30e-14!83;UBERON:0009618!2.30e-14!83;UBERON:0007285!2.30e-14!83;UBERON:0005256!1.44e-12!143;UBERON:0004290!3.62e-09!70;UBERON:0000475!9.10e-09!365;UBERON:0000486!2.70e-08!82;UBERON:0002067!3.83e-08!9;UBERON:0004016!3.83e-08!9;UBERON:0010083!3.83e-08!9;UBERON:0000075!5.74e-08!13;UBERON:0005944!5.74e-08!13;UBERON:0004288!5.74e-08!13;UBERON:0003089!5.74e-08!13;UBERON:0001758!6.52e-07!6;UBERON:0003672!6.52e-07!6;UBERON:0002100!9.58e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;6.47e-14;41!UBERON:0001434;1.27e-11;36!UBERON:0002199;1.81e-10;46!UBERON:0002416;1.81e-10;46!UBERON:0004765;4.92e-10;26!UBERON:0000075;6.08e-10;16!UBERON:0003102;6.87e-09;50!UBERON:0002067;1.29e-07;9!UBERON:0001758;1.89e-07;6!UBERON:0003672;1.89e-07;6!UBERON:0001474;3.06e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.11e-17,41;UBERON:0003102,2.38e-17,99;UBERON:0002199,1.26e-14,46;UBERON:0002416,1.26e-14,46;UBERON:0000075,6.89e-10,16;UBERON:0011137,7.48e-08,14;UBERON:0002067,1.49e-07,9;UBERON:0004016,1.49e-07,9;UBERON:0010083,1.49e-07,9;UBERON:0001758,1.93e-07,6;UBERON:0003672,1.93e-07,6;UBERON:0003104,3.78e-07,160;UBERON:0009142,3.78e-07,160 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.245733936501509,0,3.49506195408276,2.11013582582763,3.83675694176145,3.31397375727916,0,0,0.730310090387373,0.487932798790507,2.09305798730539,3.67201244239655,0.940364164434263,0.286235987131057,0,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,1.5905718941022,0.486634870302636,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,0.506522046658319,1.72131935057184,0.573673241497627,0.354668382198357,1.68203280042692,0,0.74000264525148,0,0,0.163461903113459,0.151357427644931,0,0.937285727335186,0.936480230490962,1.1409436430889,0.896692083310806,9.62962888878872,11.0073602170329,12.7810234099046,5.30800845262722,20.0219937218182,2.89312187292143,2.37600571456411,2.47266929278557,0,0,12.2885363186468,8.25782231154963,9.6972440419464,14.4862614890677,8.58165828237255,0.751190294532984,0,11.1221574127094,6.62027905337559,1.69545520927649,6.60200411385685,3.7098910525838,3.86460810068444,3.35010341396862,3.54430297706659,1.36411807225678,8.58274832429989,5.52299391853796,0.80823028409406,6.74518225781567,3.52632343796741,2.54340888465731,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,4.5026865673502,4.14404764057442,0.928735856063958,10.8281922250438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09750285408626,1.1240175325762,0,0,1.95484983186195,0,2.88662684050547,0.579652024875384,0.821860859650752,0,0,0,0,0,0,0,0,0,2.18376766658517,0.283550194484773,5.46306988487375,3.77824120068151,4.21720947081732,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0.112131084345361,0,0.51336800074665,2.71470603091333,0,0.845302752556,0,1.04007436911366,2.57207374262142,2.83698264046557,1.3321108950805,0.57191197463259,0,1.64648067356154,0,0,0,0,0,0,0,0,0,1.67737398844108,2.29723871668228,2.85273810081437,2.75084482668401,0.821905290201534,1.61154866915906,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.858840442033979,4.00136416847742,2.71265023699736,4.36738809214695,7.67244651827796,8.35822799679854,5.50564650465752,3.91229929646035,0,1.03473071292505,3.98535359121262,3.31864503375066,4.43106433787223,0.391602314925481,0.343143423810856,0,0,0,1.21251028578504,0,1.5119514666484,0.496215615637554,2.91577749247319,0.280660094433074,0,0,1.12597744800525,0,0.771048469013278,0.887808626565635,0.821271560138091,0,0.116210378459959,0,0.802025881213139,0,2.18147451512753,4.73437036817464,2.88473712910733,0.451199612907412,1.46329140498388,0.784349769176855,0,1.58327443339314,0,0,6.26156156696204,0,1.08378575017541,2.50844886927427,0.254876273045038,0,2.46262230194396,0,0,0,0,0,0,5.76887628355563,6.02319349420292,0.574265537996172,0,0,1.54673149267395,0.308097234229289,0.767518373630648,5.37562632689669,7.30457665104261,3.33538396002726,1.96021243057032,0.178064071293475,0,0,0,0,0.464845549297286,1.88887408098384,0,0,0,0,0,0,0,5.06207079549961,0.571890581771475,0.511795582622668,1.28381696410176,0,0,4.67668389716618,1.37268514868027,2.23843564456804,0,0,0,0.975267478179181,0,0,3.68549760801562,3.53513579884282,0,0,0,0,0.578775534266688,0.655894752046633,0.202910376962704,0.30982349809975,0,3.15504974848913,2.65272410735427,0,0.354761064070598,0.211107635297664,0,0.75894634753143,0.349934720244983,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,17.3323049551912,0,0,0.307160702099232,0,0,2.89402633059555,1.31843099381408,0,0,0,0,5.21570280760989,0,2.79935628895627,5.93131117572357,0,0.511572370226872,0,0,33.3410970433911,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76008784295104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74297483886435,0,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0.293977192243133,1.56706571844725,0,12.554980370428,0,0,0,0,0,0,1.09633539717401,0.596143835108969,0,0,11.7833465769755,0,0.19980960958213,0,0,0,0,0.248505071130865,0,0.135904206073614,0,3.2639429643623,0.866851769704557,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45447355175002,0,0,0,0,0,0,7.18381149374925,0,3.9189245010647,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,3.83004754662109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17632909849086,0,0,0.149254802886874,0.467426619694449,0,0.378806010550178,0.50313580350515,1.77962244319307,0,0,0,0,0,0,0.465788870628778,0,1.32920857278997,0,0,0,0,0.363697318405119,0.107410557042488,0,0,64.8044978754309,1.71697852591396,1.34699795506368,0,0.963099152036517,0,0,0.226705925512272,6.94567422971502,0,4.83539870920016,0,0.438568099157414,0.530067437837643,0,0,0,0,0,0,0.194860308839388,0,0,2.94848863961771,0,0.633936370075881,0,0,0,6.81019144280203,0.368211900503681,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,3.18004350653419,0,0,4.93746321166957,8.26862788853641,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0.231051332300676,4.57658514560601,1.3807198521202,1.5913297769302,0,11.9005990535077,0,0,0,1.03499260351932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,1.30013224972365,0,0,0,0,0,0.215927591218621,3.34426181520935,0,0,0,0,1.60342272946051,0,0,0,0,3.0766320189947,2.30076192849726,0,0.22910686854405,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35941691750254,0,0,0,0,16.5860589706375,0,0,0,0,0,0,0,0,1.48798007266701,0,1.29787968637137,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0,29.7769294998826,3.8614456457388,0,0,0,0,0,0,0 | |phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.245733936501509,0,3.49506195408276,2.11013582582763,3.83675694176145,3.31397375727916,0,0,0.730310090387373,0.487932798790507,2.09305798730539,3.67201244239655,0.940364164434263,0.286235987131057,0,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,1.5905718941022,0.486634870302636,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,0.506522046658319,1.72131935057184,0.573673241497627,0.354668382198357,1.68203280042692,0,0.74000264525148,0,0,0.163461903113459,0.151357427644931,0,0.937285727335186,0.936480230490962,1.1409436430889,0.896692083310806,9.62962888878872,11.0073602170329,12.7810234099046,5.30800845262722,20.0219937218182,2.89312187292143,2.37600571456411,2.47266929278557,0,0,12.2885363186468,8.25782231154963,9.6972440419464,14.4862614890677,8.58165828237255,0.751190294532984,0,11.1221574127094,6.62027905337559,1.69545520927649,6.60200411385685,3.7098910525838,3.86460810068444,3.35010341396862,3.54430297706659,1.36411807225678,8.58274832429989,5.52299391853796,0.80823028409406,6.74518225781567,3.52632343796741,2.54340888465731,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,4.5026865673502,4.14404764057442,0.928735856063958,10.8281922250438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09750285408626,1.1240175325762,0,0,1.95484983186195,0,2.88662684050547,0.579652024875384,0.821860859650752,0,0,0,0,0,0,0,0,0,2.18376766658517,0.283550194484773,5.46306988487375,3.77824120068151,4.21720947081732,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0.112131084345361,0,0.51336800074665,2.71470603091333,0,0.845302752556,0,1.04007436911366,2.57207374262142,2.83698264046557,1.3321108950805,0.57191197463259,0,1.64648067356154,0,0,0,0,0,0,0,0,0,1.67737398844108,2.29723871668228,2.85273810081437,2.75084482668401,0.821905290201534,1.61154866915906,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.858840442033979,4.00136416847742,2.71265023699736,4.36738809214695,7.67244651827796,8.35822799679854,5.50564650465752,3.91229929646035,0,1.03473071292505,3.98535359121262,3.31864503375066,4.43106433787223,0.391602314925481,0.343143423810856,0,0,0,1.21251028578504,0,1.5119514666484,0.496215615637554,2.91577749247319,0.280660094433074,0,0,1.12597744800525,0,0.771048469013278,0.887808626565635,0.821271560138091,0,0.116210378459959,0,0.802025881213139,0,2.18147451512753,4.73437036817464,2.88473712910733,0.451199612907412,1.46329140498388,0.784349769176855,0,1.58327443339314,0,0,6.26156156696204,0,1.08378575017541,2.50844886927427,0.254876273045038,0,2.46262230194396,0,0,0,0,0,0,5.76887628355563,6.02319349420292,0.574265537996172,0,0,1.54673149267395,0.308097234229289,0.767518373630648,5.37562632689669,7.30457665104261,3.33538396002726,1.96021243057032,0.178064071293475,0,0,0,0,0.464845549297286,1.88887408098384,0,0,0,0,0,0,0,5.06207079549961,0.571890581771475,0.511795582622668,1.28381696410176,0,0,4.67668389716618,1.37268514868027,2.23843564456804,0,0,0,0.975267478179181,0,0,3.68549760801562,3.53513579884282,0,0,0,0,0.578775534266688,0.655894752046633,0.202910376962704,0.30982349809975,0,3.15504974848913,2.65272410735427,0,0.354761064070598,0.211107635297664,0,0.75894634753143,0.349934720244983,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,17.3323049551912,0,0,0.307160702099232,0,0,2.89402633059555,1.31843099381408,0,0,0,0,5.21570280760989,0,2.79935628895627,5.93131117572357,0,0.511572370226872,0,0,33.3410970433911,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76008784295104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74297483886435,0,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0.293977192243133,1.56706571844725,0,12.554980370428,0,0,0,0,0,0,1.09633539717401,0.596143835108969,0,0,11.7833465769755,0,0.19980960958213,0,0,0,0,0.248505071130865,0,0.135904206073614,0,3.2639429643623,0.866851769704557,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45447355175002,0,0,0,0,0,0,7.18381149374925,0,3.9189245010647,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,3.83004754662109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17632909849086,0,0,0.149254802886874,0.467426619694449,0,0.378806010550178,0.50313580350515,1.77962244319307,0,0,0,0,0,0,0.465788870628778,0,1.32920857278997,0,0,0,0,0.363697318405119,0.107410557042488,0,0,64.8044978754309,1.71697852591396,1.34699795506368,0,0.963099152036517,0,0,0.226705925512272,6.94567422971502,0,4.83539870920016,0,0.438568099157414,0.530067437837643,0,0,0,0,0,0,0.194860308839388,0,0,2.94848863961771,0,0.633936370075881,0,0,0,6.81019144280203,0.368211900503681,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,3.18004350653419,0,0,4.93746321166957,8.26862788853641,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0.231051332300676,4.57658514560601,1.3807198521202,1.5913297769302,0,11.9005990535077,0,0,0,1.03499260351932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,1.30013224972365,0,0,0,0,0,0.215927591218621,3.34426181520935,0,0,0,0,1.60342272946051,0,0,0,0,3.0766320189947,2.30076192849726,0,0.22910686854405,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35941691750254,0,0,0,0,16.5860589706375,0,0,0,0,0,0,0,0,1.48798007266701,0,1.29787968637137,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0,29.7769294998826,3.8614456457388,0,0,0,0,0,0,0 | ||
|short_description=p1@CDK15 | |short_description=p1@CDK15 | ||
}} | }} |
Latest revision as of 14:04, 19 September 2015
Short description: | p1@CDK15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDK15_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000460149, ENST00000466337, uc002uyu.1_5end |
EntrezGene: | CDK15 |
HGNC: | 14434 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.22e-19 | 23 |
fibroblast | 7.02e-16 | 76 |
osteoblast | 5.14e-09 | 11 |
osteoprogenitor cell | 5.14e-09 | 11 |
mesenchyme condensation cell | 5.14e-09 | 11 |
fibroblast of gingiva | 1.76e-07 | 5 |
fibroblast of periodontium | 1.93e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.11e-17 | 41 |
surface structure | 2.38e-17 | 99 |
integument | 1.26e-14 | 46 |
integumental system | 1.26e-14 | 46 |
subdivision of skeletal system | 6.89e-10 | 16 |
axial skeletal system | 7.48e-08 | 14 |
dermis | 1.49e-07 | 9 |
dermatome | 1.49e-07 | 9 |
future dermis | 1.49e-07 | 9 |
periodontium | 1.93e-07 | 6 |
dentition | 1.93e-07 | 6 |
mesenchyme | 3.78e-07 | 160 |
entire embryonic mesenchyme | 3.78e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.06e-08 | 5 |
myotonic disease | 6.06e-08 | 5 |
muscle tissue disease | 6.06e-08 | 5 |
myopathy | 6.06e-08 | 5 |
muscular disease | 6.06e-08 | 5 |
myotonic dystrophy | 6.06e-08 | 5 |