FFCP PHASE1:Hg19::chr1:86622632..86622650,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=255631 | |EntrezGene=255631 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20821 | |HGNC=20821 | ||
|TSSclassifier=strong | |||
|UniProt=E9PNK8 | |UniProt=E9PNK8 | ||
|association_with_transcript=-6bp_to_ENST00000496682_5end | |association_with_transcript=-6bp_to_ENST00000496682_5end | ||
|cluster_id=chr1:86622632..86622650,- | |||
|description=CAGE_peak_3_at_COL24A1_5end | |description=CAGE_peak_3_at_COL24A1_5end | ||
|id=chr1:86622632..86622650,- | |id=chr1:86622632..86622650,- | ||
|ontology_enrichment_celltype=CL:0000055!3.67e-09!180 | |ontology_enrichment_celltype=CL:0000055!3.67e-09!180 | ||
|ontology_enrichment_celltype_v019=CL:0000346;7.49e-11;3!CL:1000428;7.49e-11;3 | |ontology_enrichment_celltype_v019=CL:0000346;7.49e-11;3!CL:1000428;7.49e-11;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000346,7.00e-11,3;CL:1000428,7.00e-11,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!3.80e-11!25;UBERON:0000203!3.80e-11!25;UBERON:0001049!7.86e-11!57;UBERON:0005068!7.86e-11!57;UBERON:0006241!7.86e-11!57;UBERON:0007135!7.86e-11!57;UBERON:0002780!8.52e-11!41;UBERON:0001890!8.52e-11!41;UBERON:0006240!8.52e-11!41;UBERON:0001893!1.78e-10!34;UBERON:0003080!2.55e-10!42;UBERON:0001869!4.96e-10!32;UBERON:0003056!5.33e-10!61;UBERON:0002791!8.44e-10!33;UBERON:0002020!2.01e-09!34;UBERON:0003528!2.01e-09!34;UBERON:0002616!2.12e-09!59;UBERON:0003075!2.15e-09!86;UBERON:0007284!2.15e-09!86;UBERON:0002619!7.03e-09!22;UBERON:0001950!7.20e-09!20;UBERON:0000153!7.64e-09!129;UBERON:0007811!7.64e-09!129;UBERON:0000033!8.01e-09!123;UBERON:0002346!2.17e-08!90;UBERON:0000073!4.27e-08!94;UBERON:0001016!4.27e-08!94;UBERON:0004121!4.63e-08!169;UBERON:0001017!6.60e-08!82;UBERON:0000475!8.73e-08!365;UBERON:0005743!1.17e-07!86;UBERON:0000955!1.30e-07!69;UBERON:0006238!1.30e-07!69;UBERON:0000924!1.87e-07!173;UBERON:0006601!1.87e-07!173;UBERON:0000481!3.14e-07!347 | |ontology_enrichment_uberon=UBERON:0000956!3.80e-11!25;UBERON:0000203!3.80e-11!25;UBERON:0001049!7.86e-11!57;UBERON:0005068!7.86e-11!57;UBERON:0006241!7.86e-11!57;UBERON:0007135!7.86e-11!57;UBERON:0002780!8.52e-11!41;UBERON:0001890!8.52e-11!41;UBERON:0006240!8.52e-11!41;UBERON:0001893!1.78e-10!34;UBERON:0003080!2.55e-10!42;UBERON:0001869!4.96e-10!32;UBERON:0003056!5.33e-10!61;UBERON:0002791!8.44e-10!33;UBERON:0002020!2.01e-09!34;UBERON:0003528!2.01e-09!34;UBERON:0002616!2.12e-09!59;UBERON:0003075!2.15e-09!86;UBERON:0007284!2.15e-09!86;UBERON:0002619!7.03e-09!22;UBERON:0001950!7.20e-09!20;UBERON:0000153!7.64e-09!129;UBERON:0007811!7.64e-09!129;UBERON:0000033!8.01e-09!123;UBERON:0002346!2.17e-08!90;UBERON:0000073!4.27e-08!94;UBERON:0001016!4.27e-08!94;UBERON:0004121!4.63e-08!169;UBERON:0001017!6.60e-08!82;UBERON:0000475!8.73e-08!365;UBERON:0005743!1.17e-07!86;UBERON:0000955!1.30e-07!69;UBERON:0006238!1.30e-07!69;UBERON:0000924!1.87e-07!173;UBERON:0006601!1.87e-07!173;UBERON:0000481!3.14e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;7.49e-11;3!UBERON:0001992;7.49e-11;3!UBERON:0000956;1.43e-08;25!UBERON:0000203;1.43e-08;25!UBERON:0001869;5.65e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000412;7.49e-11;3!UBERON:0001992;7.49e-11;3!UBERON:0000956;1.43e-08;25!UBERON:0000203;1.43e-08;25!UBERON:0001869;5.65e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,7.00e-11,3;UBERON:0001992,7.00e-11,3;UBERON:0000956,1.84e-08,25;UBERON:0000203,1.84e-08,25;UBERON:0003056,4.12e-08,61;UBERON:0001869,8.89e-08,32;UBERON:0010371,2.18e-07,104;UBERON:0001893,3.18e-07,34;UBERON:0002097,4.61e-07,41;UBERON:0002780,5.25e-07,41;UBERON:0001890,5.25e-07,41;UBERON:0003080,5.25e-07,41;UBERON:0006240,5.25e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.61560529038394,0,0.313454721478088,2.0036519099174,2.18999080116615,0.753255837568817,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0.6024118375565,0,0,0,0.587200878669695,1.10799081706375,0,1.08505435357926,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0.580418477257168,0.56738522469114,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0.50133791063589,0.289693037921647,3.1811437882044,0.486634870302636,2.74150969775797,1.33037638477538,0.527008714158756,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0,0.354668382198357,0,0,0,1.24484414159907,0,0.163461903113459,0,0,0.234321431833797,0,0,0,1.05691048779388,0.485618833104395,0.280901613404497,0,0.368502951935304,0,1.18800285728205,0.741800787835671,0,0,0.336672227908132,0.375355559615893,0.277064115484183,0.438977620880838,0,0.45071417671979,0,0.538168907066586,0.427114777637135,0,0.600182192168805,0.206105058476878,1.8034837803194,1.30281799432113,0,0.0974370051611986,1.00973509697646,0.368199594569197,0.161646056818812,1.42003837006646,1.0075209822764,1.18692414617341,0.193260853163297,0,0.573609190778008,0.609868530647977,0,0.348581828608555,0.10366105501537,0,0.36497735907583,3.12899064659632,2.57296375277154,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.370353780634118,0,0,1.44331342025273,0.579652024875384,0,0,0,0,0,0,0,0,0.297262324577456,0,0.503946384596579,0.283550194484773,0,0,0,0,0,0.621984346622316,0.720599767084807,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0.845302752556,0.797814349754612,0,0.257207374262142,0,0.532844358032199,0.428933980974443,0,0,0,0,0.791951872933429,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.895304816199478,0,0,0,0.128343036279748,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,3.32112799267718,0.737476674166813,0.955719759148911,0,0,0,0.215714200818617,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0.771048469013278,0.532685175939381,0.657017248110473,0.519254429183621,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,1.19040304263846,1.65018999841176,0,0,1.6068392984416,0.580024309752732,0.770243085573222,1.22802939780904,0.551346289938122,1.18162269355101,0.725083469571143,0.340906509664404,1.86967274858148,0,0,0.127612712494584,0,0,0.62962469366128,0,0,0,0.869932992075073,0,0,0,0.316379424718726,0,0,0.42793898803392,0.318203247925937,0.78494864019923,0.359744915166629,0.823611089208164,0.353437207037059,0,0,0,0,0.243713489631284,0,0.545999645631943,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0.957526850661834,0,1.62310970137278,0,0,0,0,0,0,0,0.851692475380653,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0.111308705022906,0,0,0.19924798825107,2.76283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.552896299656123,0,0,0,0,1.61595542857974,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,1.74830236878417,0,0,0,0,1.99052386215701,0.265372693510018,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,2.41981432097328,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0.316553979779393,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,1.73370353940911,0,0,0,0,0,1.39641200636127,0.458320848023367,0,0,0,0,1.74677028465488,0,0,0,0,0,0,0,0,0.953423842781029,0.482259445395058,0.550157746388935,0.83088067605837,0,0,1.03274246318642,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0.681552087141687,0,0.146552233678082,0,0.258565912723101,0,0,0.704815022316672,0,11.0043013569766,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,3.004582336956,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0.597019211547496,0.934853239388898,0.554805861502613,2.46223906857616,1.0062716070103,0.889811221596536,0,0.151230923763239,0,0.443565449968902,0.477890301491107,1.79921244865442,0.776314784381297,0,0,0,2.25386413495828,0,0.406870733204662,1.09109195521536,0.537052785212442,0,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0,1.41539347670307,0,0,0,0,0,0,0,0,0.352675943690684,0,0.385375350578757,1.41696576325585,0.957803154342908,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0.994581110581374,0.0752103283492573,0,0,0,0,0,1.2156765231311,0.781078098613847,1.86018116851066,1.14148458349032,0.5469748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| ||
|short_description=p3@COL24A1 | |short_description=p3@COL24A1 | ||
}} | }} |
Latest revision as of 14:06, 19 September 2015
Short description: | p3@COL24A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COL24A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000496682_5end |
EntrezGene: | COL24A1 |
HGNC: | 20821 |
UniProt: | E9PNK8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 7.00e-11 | 3 |
stem cell of epidermis | 7.00e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 7.00e-11 | 3 |
papillary layer of dermis | 7.00e-11 | 3 |
cerebral cortex | 1.84e-08 | 25 |
pallium | 1.84e-08 | 25 |
pre-chordal neural plate | 4.12e-08 | 61 |
cerebral hemisphere | 8.89e-08 | 32 |
ecto-epithelium | 2.18e-07 | 104 |
telencephalon | 3.18e-07 | 34 |
skin of body | 4.61e-07 | 41 |
regional part of forebrain | 5.25e-07 | 41 |
forebrain | 5.25e-07 | 41 |
anterior neural tube | 5.25e-07 | 41 |
future forebrain | 5.25e-07 | 41 |