FFCP PHASE1:Hg19::chr1:86889771..86889793,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9635 | |EntrezGene=9635 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2016 | |HGNC=2016 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQC9,E7EUD9 | |UniProt=Q9UQC9,E7EUD9 | ||
|association_with_transcript=2bp_to_ENST00000370565,ENST00000439777,NM_006536,uc001dlr.3_5end | |association_with_transcript=2bp_to_ENST00000370565,ENST00000439777,NM_006536,uc001dlr.3_5end | ||
|cluster_id=chr1:86889771..86889793,+ | |||
|coexpression_cluster_id=C2603 | |||
|description=CAGE_peak_3_at_CLCA2_5end | |description=CAGE_peak_3_at_CLCA2_5end | ||
|id=chr1:86889771..86889793,+ | |id=chr1:86889771..86889793,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.40e-14!254;CL:0002076!2.23e-14!43;CL:0002159!6.06e-12!13;CL:0000223!6.30e-10!59;CL:0002251!2.07e-09!21;CL:0002077!9.13e-09!33;CL:0000076!1.16e-08!62;CL:0000197!1.40e-07!6;CL:0000098!1.40e-07!6;CL:0002167!1.40e-07!6;CL:0000622!1.62e-07!5;CL:0002368!1.84e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.40e-14!254;CL:0002076!2.23e-14!43;CL:0002159!6.06e-12!13;CL:0000223!6.30e-10!59;CL:0002251!2.07e-09!21;CL:0002077!9.13e-09!33;CL:0000076!1.16e-08!62;CL:0000197!1.40e-07!6;CL:0000098!1.40e-07!6;CL:0002167!1.40e-07!6;CL:0000622!1.62e-07!5;CL:0002368!1.84e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002159;6.47e-24;14!CL:0002076;5.83e-18;42!CL:0002368;3.83e-13;13!CL:0002327;7.14e-13;4!CL:0002077;5.16e-12;34!CL:0000362;1.66e-11;9!CL:0000244;2.74e-11;4!CL:0000731;2.74e-11;4!CL:0002251;1.25e-10;20!CL:0002166;1.50e-10;3!CL:0002621;2.01e-10;3!CL:0000622;3.16e-10;5!CL:0000154;1.64e-08;6!CL:0000240;2.39e-08;6!CL:0000311;2.39e-08;6!CL:0000079;2.39e-08;6!CL:0000237;2.39e-08;6!CL:0000317;3.18e-07;2!CL:1000448;3.18e-07;2!CL:0002308;3.18e-07;2!CL:0002140;3.18e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,8.51e-24,14;CL:0002076,9.56e-21,42;CL:0002077,8.83e-14,34;CL:0000223,1.26e-13,58;CL:0002368,3.75e-13,13;CL:0000066,4.50e-13,253;CL:0002327,6.75e-13,4;CL:0000362,1.79e-11,9;CL:0000244,1.97e-11,4;CL:0000731,1.97e-11,4;CL:0002251,1.31e-10,20;CL:0002166,1.48e-10,3;CL:0002621,2.07e-10,3;CL:0000622,2.95e-10,5;CL:0000154,1.55e-08,6;CL:0000240,2.46e-08,6;CL:0000311,2.46e-08,6;CL:0000079,2.46e-08,6;CL:0000237,2.46e-08,6;CL:0000036,2.46e-08,6;CL:0000357,2.46e-08,6;CL:0000114,2.46e-08,6;CL:0000221,3.72e-08,72;CL:0000317,3.00e-07,2;CL:1000448,3.00e-07,2;CL:0002308,3.00e-07,2;CL:0002140,3.00e-07,2;CL:0002321,5.03e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000223;1.23e-08;58!CL:0000357;2.39e-08;6!CL:0000114;2.39e-08;6 | |||
|ontology_enrichment_disease=DOID:1749!5.50e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.15e-12!95;UBERON:0000165!9.32e-12!28;UBERON:0000930!9.32e-12!28;UBERON:0000166!5.50e-11!21;UBERON:0001444!7.48e-10!48;UBERON:0001004!9.63e-10!72;UBERON:0000161!1.14e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;1.93e-13;19!UBERON:0000166;1.93e-13;19!UBERON:0003729;2.43e-13;13!UBERON:0001911;7.14e-13;4!UBERON:0000165;2.37e-12;28!UBERON:0000486;3.60e-11;12!UBERON:0001949;2.01e-10;3!UBERON:0000344;3.49e-10;20!UBERON:0001828;3.83e-09;8!UBERON:0000365;4.86e-09;5!UBERON:0001003;1.11e-08;15!UBERON:0007376;1.11e-08;15!UBERON:0001708;5.50e-08;4!UBERON:0008895;5.50e-08;4!UBERON:0010371;1.37e-07;31!UBERON:0005910;1.55e-07;6!UBERON:0002419;3.18e-07;2!UBERON:0007771;3.18e-07;2!UBERON:0003297;3.18e-07;2!UBERON:0001821;3.18e-07;2!UBERON:0003487;3.18e-07;2!UBERON:0001820;3.18e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.22e-16,99;UBERON:0000166,1.42e-13,22;UBERON:0003729,3.39e-13,13;UBERON:0001911,6.75e-13,4;UBERON:0005333,6.75e-13,4;UBERON:0008425,6.75e-13,4;UBERON:0005311,6.75e-13,4;UBERON:0000165,8.56e-12,29;UBERON:0000930,8.56e-12,29;UBERON:0000033,7.23e-11,56;UBERON:0000153,1.00e-10,62;UBERON:0007811,1.00e-10,62;UBERON:0000161,1.04e-10,36;UBERON:0001949,2.07e-10,3;UBERON:0001004,2.12e-10,74;UBERON:0000344,4.25e-10,20;UBERON:0000365,3.75e-09,5;UBERON:0001828,5.24e-09,8;UBERON:0001003,1.14e-08,15;UBERON:0007376,1.14e-08,15;UBERON:0007383,1.14e-08,15;UBERON:0001444,3.38e-08,49;UBERON:0001708,5.45e-08,4;UBERON:0008895,5.45e-08,4;UBERON:0005910,1.25e-07,6;UBERON:0004119,1.53e-07,160;UBERON:0000925,1.53e-07,160;UBERON:0006595,1.53e-07,160;UBERON:0002419,3.00e-07,2;UBERON:0007771,3.00e-07,2;UBERON:0003297,3.00e-07,2;UBERON:0001821,3.00e-07,2;UBERON:0003487,3.00e-07,2;UBERON:0001820,3.00e-07,2;UBERON:0005089,3.00e-07,2;UBERON:0005088,3.00e-07,2 | |||
|phase1_expression=0,0.642301571672949,0.845726424575827,0,0.893922188854576,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.50602959389125,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,2.18577172975525,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0.379891534993739,2.25095607382472,2.0078563452417,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,1.02077085627447,0,1.23990937410919,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0,0,0,0,0,0.206105058476878,0.257640540045629,0.558350568994769,0,0,0,0.0920498986422993,5.4959659318396,0.355009592516614,0.10075209822764,0,21.4519547011259,21.5469435266759,14.9138389602282,0,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,2.16563844500876,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,11.4140296824971,2.24803506515239,4.2222168412885,19.9065157090839,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,24.370796836562,39.8117643831297,21.9751400725699,8.50805965677059,8.13775027839093,3.83382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80863626235752,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.892144943985809,0.473107245101804,1.87426263988341,0.601892199455438,0,0,0,0,0.781952530212746,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.246381468041427,0,0,0,24.4617893770008,4.60404944679482,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.412164046590889,0,0,9.18824860793876,5.85054221432869,0,0,0,0,0,0.537101224341368,0,0,0,11.2393742445465,5.76570202095319,5.10450849978336,3.54052232994425,0,0.94443704049192,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.422215270595328,0.329294892959902,0,0,5.77332676353072,1.34060455107157,0,0.282431402330337,1.72202149068492,1.68471475667626,1.33029046061003,12.1753402109689,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0.260427761085233,56.5866199975386,0,0.796554137998498,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,3.62501735124369,0.692552326534174,0,0.69169171316418,2.33369875465408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.881931576729399,2.17648016451006,0.17472666824203,0,0,0.0730893170861856,0,4.55848377495571,0,0.451961481561065,0.548167698587004,0,0,0,0,0,0.599428828746391,0,0.114536596165916,0,0,0,2.82832841540154,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,6.03782437678679,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,1.08599920350743,0.864221491201268,1.30634944043764,0,0,0.170388021785422,0,0,0,0,0,0,0.704815022316672,0,0,0.828478110694391,0,0,0,4.46838880439127,0,0,0,0.655745261419609,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0.298509605773748,0,0,2.27283606330107,3.0188148210309,7.11848977277229,0.457680136793847,1.05861646634267,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0.343395705182793,0,1.26184898228651,0,0.428883182749851,0,0,0,0,0,0.617602894321944,0.877136198314828,0.176689145945881,0.38582807654183,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79759015438889,4.97661808026378,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,1.37406805901436,0,4.21885776599862,0.231051332300676,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.8742142381954,7.34089451503985,0.691259661814092,0,1.06498800657509,1.10777426186905,0,0,0.31020638566432,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0.371995018166751,1.84870251452567,0.432626562123789,0.126166424835079,0,0,0.101988829741982,0.26721740526556,0.18378979906969,0,0,0,0,0,2.34557380091079,0.23806443146374,0.0645889098360061,0,0,0,0,1.74173398317569,0.684466602170562,1.48174516632093,1.57788851863888,0,0.162806537221949,0,1.9307228228694,0,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p3@CLCA2 | |short_description=p3@CLCA2 | ||
}} | }} |
Latest revision as of 14:18, 19 September 2015
Short description: | p3@CLCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLCA2_5end |
Coexpression cluster: | C2603_breast_Mallassezderived_Gingival_Sebocyte_Keratinocyte_keratoacanthoma_Prostate |
Association with transcript: | 2bp_to_ENST00000370565, ENST00000439777, NM_006536, uc001dlr.3_5end |
EntrezGene: | CLCA2 |
HGNC: | 2016 |
UniProt: | Q9UQC9E7EUD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 8.51e-24 | 14 |
endo-epithelial cell | 9.56e-21 | 42 |
ecto-epithelial cell | 8.83e-14 | 34 |
endodermal cell | 1.26e-13 | 58 |
respiratory epithelial cell | 3.75e-13 | 13 |
epithelial cell | 4.50e-13 | 253 |
mammary gland epithelial cell | 6.75e-13 | 4 |
epidermal cell | 1.79e-11 | 9 |
transitional epithelial cell | 1.97e-11 | 4 |
urothelial cell | 1.97e-11 | 4 |
epithelial cell of alimentary canal | 1.31e-10 | 20 |
epithelial cell of Malassez | 1.48e-10 | 3 |
gingival epithelial cell | 2.07e-10 | 3 |
acinar cell | 2.95e-10 | 5 |
protein secreting cell | 1.55e-08 | 6 |
stratified squamous epithelial cell | 2.46e-08 | 6 |
keratin accumulating cell | 2.46e-08 | 6 |
stratified epithelial cell | 2.46e-08 | 6 |
keratinizing barrier epithelial cell | 2.46e-08 | 6 |
epithelial fate stem cell | 2.46e-08 | 6 |
stratified epithelial stem cell | 2.46e-08 | 6 |
surface ectodermal cell | 2.46e-08 | 6 |
ectodermal cell | 3.72e-08 | 72 |
sebum secreting cell | 3.00e-07 | 2 |
epithelial cell of sweat gland | 3.00e-07 | 2 |
epithelial cell of skin gland | 3.00e-07 | 2 |
acinar cell of sebaceous gland | 3.00e-07 | 2 |
embryonic cell | 5.03e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.22e-16 | 99 |
oral opening | 1.42e-13 | 22 |
mouth mucosa | 3.39e-13 | 13 |
mammary gland | 6.75e-13 | 4 |
mammary bud | 6.75e-13 | 4 |
mammary ridge | 6.75e-13 | 4 |
mammary placode | 6.75e-13 | 4 |
mouth | 8.56e-12 | 29 |
stomodeum | 8.56e-12 | 29 |
head | 7.23e-11 | 56 |
anterior region of body | 1.00e-10 | 62 |
craniocervical region | 1.00e-10 | 62 |
orifice | 1.04e-10 | 36 |
gingival epithelium | 2.07e-10 | 3 |
respiratory system | 2.12e-10 | 74 |
mucosa | 4.25e-10 | 20 |
urothelium | 3.75e-09 | 5 |
gingiva | 5.24e-09 | 8 |
skin epidermis | 1.14e-08 | 15 |
outer epithelium | 1.14e-08 | 15 |
enveloping layer of ectoderm | 1.14e-08 | 15 |
subdivision of head | 3.38e-08 | 49 |
jaw skeleton | 5.45e-08 | 4 |
splanchnocranium | 5.45e-08 | 4 |
transitional epithelium | 1.25e-07 | 6 |
endoderm-derived structure | 1.53e-07 | 160 |
endoderm | 1.53e-07 | 160 |
presumptive endoderm | 1.53e-07 | 160 |
skin gland | 3.00e-07 | 2 |
epidermis gland | 3.00e-07 | 2 |
gland of integumental system | 3.00e-07 | 2 |
sebaceous gland | 3.00e-07 | 2 |
skin sebaceous gland | 3.00e-07 | 2 |
sweat gland | 3.00e-07 | 2 |
sweat gland placode | 3.00e-07 | 2 |
sebaceous gland placode | 3.00e-07 | 2 |