FFCP PHASE1:Hg19::chr17:34329097..34329112,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6358,348249,6359 | |EntrezGene=6358,348249,6359 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10612,10613 | |HGNC=10612,10613 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000536149,uc010wcs.1,uc010wct.1,uc010wcu.1_5end | |||
|cluster_id=chr17:34329097..34329112,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_CCL14_5end,CAGE_peak_5_at_CCL15_5end | |||
|id=chr17:34329097..34329112,- | |||
|ontology_enrichment_celltype=CL:0000181!8.07e-20!12;CL:0000417!8.07e-20!12;CL:0000668!8.07e-20!12;CL:0000414!8.07e-20!12;CL:0000412!8.07e-20!12;CL:0000182!8.07e-20!12;CL:0000223!8.91e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.43e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.74e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.29e-19;11!UBERON:0009497;1.19e-16;13!UBERON:0003104;1.15e-10;31!UBERON:0001041;2.34e-07;30 | |||
|ontology_enrichment_disease=DOID:3493!1.80e-14!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.85e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.38e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0009854!1.79e-22!23;UBERON:0002107!6.92e-22!19;UBERON:0006925!6.92e-22!19;UBERON:0008836!6.92e-22!19;UBERON:0009497!1.35e-20!25;UBERON:0000015!1.35e-20!25;UBERON:0002423!1.35e-20!25;UBERON:0006235!1.35e-20!25;UBERON:0004161!1.35e-20!25;UBERON:0009856!1.02e-19!26;UBERON:0008835!9.50e-19!22;UBERON:0003894!9.50e-19!22;UBERON:0007499!2.31e-16!25;UBERON:0005057!1.09e-15!26;UBERON:0004921!8.54e-15!129;UBERON:0004185!8.54e-15!129;UBERON:0000160!3.35e-14!27;UBERON:0005409!1.39e-13!35;UBERON:0001007!3.50e-13!155;UBERON:0001555!3.50e-13!155;UBERON:0007026!3.50e-13!155;UBERON:0002365!5.65e-13!31;UBERON:0002330!5.65e-13!31;UBERON:0005172!7.26e-13!55;UBERON:0005173!7.26e-13!55;UBERON:0004119!9.02e-12!169;UBERON:0000925!9.02e-12!169;UBERON:0006595!9.02e-12!169;UBERON:0002417!2.09e-11!61;UBERON:0000916!2.09e-11!61;UBERON:0002368!2.33e-11!35;UBERON:0003929!6.83e-11!54;UBERON:0000949!8.99e-11!45;UBERON:0005177!1.79e-09!107;UBERON:0005911!5.29e-08!82;UBERON:0001154!8.12e-08!1;UBERON:0001153!8.12e-08!1;UBERON:0001041!1.43e-07!98;UBERON:0009569!1.61e-07!113;UBERON:0000077!2.64e-07!130;UBERON:0002108!2.67e-07!14;UBERON:0001155!3.14e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.42e-17;19!UBERON:0006925;1.42e-17;19!UBERON:0002423;2.32e-13;25!UBERON:0000160;5.43e-12;17!UBERON:0002108;1.95e-11;4!UBERON:0002365;9.34e-11;31!UBERON:0002330;9.34e-11;31!UBERON:0005409;1.93e-09;22!UBERON:0002368;1.33e-08;33!UBERON:0000949;5.71e-07;43!UBERON:0005172;8.90e-07;52!UBERON:0005173;8.90e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.72e-17,19;UBERON:0006925,1.72e-17,19;UBERON:0008836,1.72e-17,19;UBERON:0008835,4.13e-15,22;UBERON:0003894,4.13e-15,22;UBERON:0009854,1.87e-14,23;UBERON:0007499,2.68e-13,25;UBERON:0009497,2.68e-13,25;UBERON:0000015,2.68e-13,25;UBERON:0002423,2.68e-13,25;UBERON:0006235,2.68e-13,25;UBERON:0004161,2.68e-13,25;UBERON:0009856,8.71e-13,26;UBERON:0000160,4.57e-12,17;UBERON:0002108,1.58e-11,4;UBERON:0002365,1.02e-10,31;UBERON:0002330,1.02e-10,31;UBERON:0002368,1.73e-09,35;UBERON:0003929,1.40e-08,54;UBERON:0005172,1.48e-08,54;UBERON:0005173,1.48e-08,54;UBERON:0005409,1.99e-08,25;UBERON:0004921,4.52e-08,118;UBERON:0002417,1.15e-07,60;UBERON:0000916,1.15e-07,60;UBERON:0000949,2.31e-07,45 | |||
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|short_description=p3@CCL14,p5@CCL15 | |||
}} | }} |
Latest revision as of 16:10, 19 September 2015
Short description: | p3@CCL14, p5@CCL15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCL14_5end, CAGE_peak_5_at_CCL15_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000536149, uc010wcs.1, uc010wct.1, uc010wcu.1_5end |
EntrezGene: | 6358,348249,6359 |
HGNC: | 10613&submit=Submit 10612, 10613 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.74e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.72e-17 | 19 |
digestive gland | 1.72e-17 | 19 |
liver bud | 1.72e-17 | 19 |
hepatic diverticulum | 4.13e-15 | 22 |
liver primordium | 4.13e-15 | 22 |
digestive tract diverticulum | 1.87e-14 | 23 |
epithelial sac | 2.68e-13 | 25 |
epithelium of foregut-midgut junction | 2.68e-13 | 25 |
anatomical boundary | 2.68e-13 | 25 |
hepatobiliary system | 2.68e-13 | 25 |
foregut-midgut junction | 2.68e-13 | 25 |
septum transversum | 2.68e-13 | 25 |
sac | 8.71e-13 | 26 |
intestine | 4.57e-12 | 17 |
small intestine | 1.58e-11 | 4 |
exocrine gland | 1.02e-10 | 31 |
exocrine system | 1.02e-10 | 31 |
endocrine gland | 1.73e-09 | 35 |
gut epithelium | 1.40e-08 | 54 |
abdomen element | 1.48e-08 | 54 |
abdominal segment element | 1.48e-08 | 54 |
gastrointestinal system | 1.99e-08 | 25 |
subdivision of digestive tract | 4.52e-08 | 118 |
abdominal segment of trunk | 1.15e-07 | 60 |
abdomen | 1.15e-07 | 60 |
endocrine system | 2.31e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.38e-08 | 2 |