FFCP PHASE1:Hg19::chr12:58131931..58131942,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116986 | |EntrezGene=116986 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16921 | |HGNC=16921 | ||
|TSSclassifier=strong | |||
|UniProt=Q99490 | |UniProt=Q99490 | ||
|association_with_transcript=-312bp_to_ENST00000328568_5end | |association_with_transcript=-312bp_to_ENST00000328568_5end | ||
|cluster_id=chr12:58131931..58131942,- | |||
|coexpression_cluster_id=C181 | |||
|description=CAGE_peak_7_at_AGAP2_5end | |description=CAGE_peak_7_at_AGAP2_5end | ||
|id=chr12:58131931..58131942,- | |id=chr12:58131931..58131942,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.44e-09;6!CL:0000138;1.44e-09;6!CL:0000153;8.37e-07;9!CL:0000447;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.44e-09,6;CL:0000138,1.44e-09,6;CL:0000235,1.57e-09,6;CL:0000153,8.37e-07,9;CL:0000447,8.37e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;3.99e-50;1!DOID:4549;3.99e-50;1!DOID:5861;3.99e-50;1!DOID:6496;3.99e-50;1!DOID:1115;5.42e-11;20!DOID:201;1.44e-09;6!DOID:0060100;1.44e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.99e-50,1;DOID:4549,3.99e-50,1;DOID:5861,3.99e-50,1;DOID:6496,3.99e-50,1;DOID:1115,5.42e-11,20;DOID:201,1.44e-09,6;DOID:0060100,1.44e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.57e-59!57;UBERON:0005068!1.57e-59!57;UBERON:0006241!1.57e-59!57;UBERON:0007135!1.57e-59!57;UBERON:0002616!2.63e-57!59;UBERON:0002619!1.49e-56!22;UBERON:0000955!1.93e-54!69;UBERON:0006238!1.93e-54!69;UBERON:0002020!1.24e-53!34;UBERON:0003528!1.24e-53!34;UBERON:0002780!9.30e-53!41;UBERON:0001890!9.30e-53!41;UBERON:0006240!9.30e-53!41;UBERON:0001869!4.09e-52!32;UBERON:0003080!2.15e-51!42;UBERON:0001017!3.72e-51!82;UBERON:0000956!1.62e-49!25;UBERON:0000203!1.62e-49!25;UBERON:0001893!7.72e-49!34;UBERON:0001950!9.55e-49!20;UBERON:0005743!1.79e-48!86;UBERON:0003075!5.91e-46!86;UBERON:0007284!5.91e-46!86;UBERON:0002791!1.77e-45!33;UBERON:0002346!1.35e-43!90;UBERON:0000073!3.00e-43!94;UBERON:0001016!3.00e-43!94;UBERON:0007023!3.58e-35!115;UBERON:0003056!7.85e-34!61;UBERON:0000033!1.13e-27!123;UBERON:0000153!4.61e-26!129;UBERON:0007811!4.61e-26!129;UBERON:0000200!1.80e-25!6;UBERON:0004121!3.42e-24!169;UBERON:0000924!1.86e-23!173;UBERON:0006601!1.86e-23!173;UBERON:0001871!1.25e-18!7;UBERON:0000025!5.11e-15!194;UBERON:0002021!3.57e-14!5;UBERON:0000349!5.73e-14!5;UBERON:0000988!1.77e-13!3;UBERON:0002771!3.49e-13!3;UBERON:0004733!1.44e-12!12;UBERON:0002028!1.44e-12!12;UBERON:0007277!1.44e-12!12;UBERON:0002680!5.19e-12!9;UBERON:0001895!5.19e-12!9;UBERON:0010092!5.19e-12!9;UBERON:0004111!1.29e-11!241;UBERON:0004732!1.50e-11!13;UBERON:0000064!1.65e-10!219;UBERON:0003076!6.36e-10!15;UBERON:0003057!6.36e-10!15;UBERON:0001954!6.63e-10!2;UBERON:0003022!6.63e-10!2;UBERON:0002421!6.63e-10!2;UBERON:0002600!6.63e-10!2;UBERON:0001870!7.90e-10!2;UBERON:0000483!9.14e-10!309;UBERON:0000119!1.35e-09!312;UBERON:0001897!1.87e-09!2;UBERON:0002148!2.74e-09!2;UBERON:0009662!2.74e-09!2;UBERON:0002360!3.11e-09!2;UBERON:0000094!3.11e-09!2;UBERON:0007645!3.11e-09!2;UBERON:0002298!9.52e-09!8;UBERON:0000477!1.22e-08!286;UBERON:0001872!2.62e-08!5;UBERON:0002308!2.30e-07!9;UBERON:0000125!2.30e-07!9;UBERON:0000481!5.09e-07!347;UBERON:0000475!5.12e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;9.45e-18;3!UBERON:0004755;9.45e-18;3!UBERON:0002021;3.26e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,9.46e-18,3;UBERON:0004755,9.46e-18,3;UBERON:0002021,2.94e-11,5 | |||
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| ||
|short_description=p7@AGAP2 | |short_description=p7@AGAP2 | ||
}} | }} |
Latest revision as of 16:10, 19 September 2015
Short description: | p7@AGAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_AGAP2_5end |
Coexpression cluster: | C181_liposarcoma_somatostatinoma_neuroblastoma_mesothelioma_nonsmall_small_Alveolar |
Association with transcript: | -312bp_to_ENST00000328568_5end |
EntrezGene: | AGAP2 |
HGNC: | 16921 |
UniProt: | Q99490 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.44e-09 | 6 |
chondrocyte | 1.44e-09 | 6 |
macrophage | 1.57e-09 | 6 |
GAG secreting cell | 8.37e-07 | 9 |
carbohydrate secreting cell | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 9.46e-18 | 3 |
skeletal tissue | 9.46e-18 | 3 |
occipital lobe | 2.94e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.99e-50 | 1 |
extraosseous chondrosarcoma | 3.99e-50 | 1 |
myxoid chondrosarcoma | 3.99e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 3.99e-50 | 1 |
sarcoma | 5.42e-11 | 20 |
connective tissue cancer | 1.44e-09 | 6 |
musculoskeletal system cancer | 1.44e-09 | 6 |