FFCP PHASE1:Hg19::chr10:86001259..86001291,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26103 | |EntrezGene=26103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23404 | |HGNC=23404 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2V4 | |UniProt=Q9P2V4 | ||
|association_with_transcript=-42bp_to_ENST00000372105,NM_015613,uc001kcz.1_5end | |association_with_transcript=-42bp_to_ENST00000372105,NM_015613,uc001kcz.1_5end | ||
|cluster_id=chr10:86001259..86001291,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_1_at_LRIT1_5end | |description=CAGE_peak_1_at_LRIT1_5end | ||
|id=chr10:86001259..86001291,- | |id=chr10:86001259..86001291,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.83e-14;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!2.04e-45!2;UBERON:0002757!2.04e-45!2;UBERON:0010134!2.04e-45!2;UBERON:0002784!2.04e-45!2;UBERON:0005408!2.04e-45!2;UBERON:0001899!2.04e-45!2;UBERON:0003296!2.63e-23!4;UBERON:0010133!2.63e-23!4;UBERON:0001894!8.94e-14!7;UBERON:0006222!8.94e-14!7;UBERON:0002360!2.32e-12!2;UBERON:0000094!2.32e-12!2;UBERON:0007645!2.32e-12!2;UBERON:0002148!3.24e-12!2;UBERON:0009662!3.24e-12!2;UBERON:0005743!4.89e-09!86;UBERON:0000988!1.40e-08!3;UBERON:0006331!1.40e-08!3;UBERON:0000073!3.42e-08!94;UBERON:0001016!3.42e-08!94;UBERON:0001017!9.97e-07!82 | |ontology_enrichment_uberon=UBERON:0001905!2.04e-45!2;UBERON:0002757!2.04e-45!2;UBERON:0010134!2.04e-45!2;UBERON:0002784!2.04e-45!2;UBERON:0005408!2.04e-45!2;UBERON:0001899!2.04e-45!2;UBERON:0003296!2.63e-23!4;UBERON:0010133!2.63e-23!4;UBERON:0001894!8.94e-14!7;UBERON:0006222!8.94e-14!7;UBERON:0002360!2.32e-12!2;UBERON:0000094!2.32e-12!2;UBERON:0007645!2.32e-12!2;UBERON:0002148!3.24e-12!2;UBERON:0009662!3.24e-12!2;UBERON:0005743!4.89e-09!86;UBERON:0000988!1.40e-08!3;UBERON:0006331!1.40e-08!3;UBERON:0000073!3.42e-08!94;UBERON:0001016!3.42e-08!94;UBERON:0001017!9.97e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.05e-79;2!UBERON:0002757;1.05e-79;2!UBERON:0010134;1.05e-79;2!UBERON:0005408;1.05e-79;2!UBERON:0001899;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0002784;1.48e-40;4!UBERON:0001894;1.02e-23;7!UBERON:0002360;6.96e-21;2!UBERON:0000094;6.96e-21;2!UBERON:0010743;6.96e-21;2!UBERON:0000966;3.22e-09;5!UBERON:0005388;3.22e-09;5!UBERON:0001802;3.22e-09;5!UBERON:0000970;6.17e-09;20!UBERON:0002104;1.48e-08;21!UBERON:0000020;6.75e-08;23!UBERON:0001032;1.31e-07;24!UBERON:0004456;1.31e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.05e-79,2;UBERON:0002757,1.05e-79,2;UBERON:0010134,1.05e-79,2;UBERON:0005408,1.05e-79,2;UBERON:0001899,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0002784,1.48e-40,4;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0002360,6.96e-21,2;UBERON:0000094,6.96e-21,2;UBERON:0010743,6.96e-21,2;UBERON:0000970,1.48e-08,21;UBERON:0002104,1.48e-08,21;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6;UBERON:0000020,1.31e-07,24;UBERON:0001032,1.31e-07,24;UBERON:0004456,1.31e-07,24 | |||
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|short_description=p1@LRIT1 | |short_description=p1@LRIT1 | ||
}} | }} |
Latest revision as of 16:54, 19 September 2015
Short description: | p1@LRIT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRIT1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -42bp_to_ENST00000372105, NM_015613, uc001kcz.1_5end |
EntrezGene: | LRIT1 |
HGNC: | 23404 |
UniProt: | Q9P2V4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.05e-79 | 2 |
regional part of epithalamus | 1.05e-79 | 2 |
secretory circumventricular organ | 1.05e-79 | 2 |
circumventricular organ | 1.05e-79 | 2 |
epithalamus | 1.05e-79 | 2 |
gland of diencephalon | 1.48e-40 | 4 |
neuroendocrine gland | 1.48e-40 | 4 |
regional part of diencephalon | 1.48e-40 | 4 |
diencephalon | 1.02e-23 | 7 |
future diencephalon | 1.02e-23 | 7 |
meninx | 6.96e-21 | 2 |
membrane organ | 6.96e-21 | 2 |
meningeal cluster | 6.96e-21 | 2 |
eye | 1.48e-08 | 21 |
visual system | 1.48e-08 | 21 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |
sense organ | 1.31e-07 | 24 |
sensory system | 1.31e-07 | 24 |
entire sense organ system | 1.31e-07 | 24 |