FFCP PHASE1:Hg19::chr2:206628583..206628594,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8828 | |EntrezGene=8828 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8005 | |HGNC=8005 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=58bp_to_ENST00000472299_5end | |association_with_transcript=58bp_to_ENST00000472299_5end | ||
|cluster_id=chr2:206628583..206628594,+ | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_20_at_NRP2_5end | |description=CAGE_peak_20_at_NRP2_5end | ||
|id=chr2:206628583..206628594,+ | |id=chr2:206628583..206628594,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;1.07e-17;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.07e-17,2 | |||
|ontology_enrichment_uberon=UBERON:0002420!1.03e-11!9;UBERON:0007245!1.03e-11!9;UBERON:0010009!1.03e-11!9;UBERON:0010011!1.03e-11!9;UBERON:0000454!1.03e-11!9;UBERON:0002308!1.61e-11!9;UBERON:0000125!1.61e-11!9;UBERON:0001049!4.99e-11!57;UBERON:0005068!4.99e-11!57;UBERON:0006241!4.99e-11!57;UBERON:0007135!4.99e-11!57;UBERON:0002616!1.72e-10!59;UBERON:0000369!2.24e-09!4;UBERON:0002435!2.24e-09!4;UBERON:0000204!2.24e-09!4;UBERON:0010082!2.24e-09!4;UBERON:0001896!9.68e-09!3;UBERON:0005290!9.68e-09!3;UBERON:0010096!9.68e-09!3;UBERON:0000955!4.17e-08!69;UBERON:0006238!4.17e-08!69;UBERON:0009663!7.09e-08!7;UBERON:0001017!7.54e-08!82;UBERON:0002298!9.65e-08!8;UBERON:0005383!1.29e-07!3;UBERON:0005382!1.29e-07!3;UBERON:0002780!1.39e-07!41;UBERON:0001890!1.39e-07!41;UBERON:0006240!1.39e-07!41;UBERON:0003080!2.47e-07!42;UBERON:0003075!2.76e-07!86;UBERON:0007284!2.76e-07!86;UBERON:0005743!2.94e-07!86;UBERON:0007023!3.13e-07!115;UBERON:0000073!8.09e-07!94;UBERON:0001016!8.09e-07!94;UBERON:0004733!8.85e-07!12;UBERON:0002028!8.85e-07!12;UBERON:0007277!8.85e-07!12;UBERON:0002346!9.60e-07!90 | |ontology_enrichment_uberon=UBERON:0002420!1.03e-11!9;UBERON:0007245!1.03e-11!9;UBERON:0010009!1.03e-11!9;UBERON:0010011!1.03e-11!9;UBERON:0000454!1.03e-11!9;UBERON:0002308!1.61e-11!9;UBERON:0000125!1.61e-11!9;UBERON:0001049!4.99e-11!57;UBERON:0005068!4.99e-11!57;UBERON:0006241!4.99e-11!57;UBERON:0007135!4.99e-11!57;UBERON:0002616!1.72e-10!59;UBERON:0000369!2.24e-09!4;UBERON:0002435!2.24e-09!4;UBERON:0000204!2.24e-09!4;UBERON:0010082!2.24e-09!4;UBERON:0001896!9.68e-09!3;UBERON:0005290!9.68e-09!3;UBERON:0010096!9.68e-09!3;UBERON:0000955!4.17e-08!69;UBERON:0006238!4.17e-08!69;UBERON:0009663!7.09e-08!7;UBERON:0001017!7.54e-08!82;UBERON:0002298!9.65e-08!8;UBERON:0005383!1.29e-07!3;UBERON:0005382!1.29e-07!3;UBERON:0002780!1.39e-07!41;UBERON:0001890!1.39e-07!41;UBERON:0006240!1.39e-07!41;UBERON:0003080!2.47e-07!42;UBERON:0003075!2.76e-07!86;UBERON:0007284!2.76e-07!86;UBERON:0005743!2.94e-07!86;UBERON:0007023!3.13e-07!115;UBERON:0000073!8.09e-07!94;UBERON:0001016!8.09e-07!94;UBERON:0004733!8.85e-07!12;UBERON:0002028!8.85e-07!12;UBERON:0007277!8.85e-07!12;UBERON:0002346!9.60e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;2.83e-66;2!UBERON:0000974;6.07e-23;6!UBERON:0003127;6.48e-18;2!UBERON:0001896;2.89e-12;3!UBERON:0005290;2.89e-12;3!UBERON:0002298;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,5.53e-66,2;UBERON:0003127,6.48e-18,2;UBERON:0000974,3.71e-14,10;UBERON:0001896,2.59e-12,3;UBERON:0005290,2.59e-12,3;UBERON:0010096,2.59e-12,3;UBERON:0002298,8.48e-07,6 | |||
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| ||
|short_description=p20@NRP2 | |short_description=p20@NRP2 | ||
}} | }} |
Latest revision as of 17:15, 19 September 2015
Short description: | p20@NRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_NRP2_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | 58bp_to_ENST00000472299_5end |
EntrezGene: | NRP2 |
HGNC: | 8005 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 5.53e-66 | 2 |
open tracheal system trachea | 6.48e-18 | 2 |
neck | 3.71e-14 | 10 |
medulla oblongata | 2.59e-12 | 3 |
myelencephalon | 2.59e-12 | 3 |
future myelencephalon | 2.59e-12 | 3 |
brainstem | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.07e-17 | 2 |