FFCP PHASE1:Hg19::chr7:80373052..80373071,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:80373052..80373071,-
|short_description=p11@SEMA3C
|description=CAGE_peak_11_at_SEMA3C_5end
|association_with_transcript=448bp_to_D32000_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10512 | |EntrezGene=10512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10725 | |HGNC=10725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=448bp_to_D32000_5end | |||
|cluster_id=chr7:80373052..80373071,- | |||
|coexpression_cluster_id=C1439 | |||
|description=CAGE_peak_11_at_SEMA3C_5end | |||
|id=chr7:80373052..80373071,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000214;7.90e-12;3!CL:0000135;2.32e-11;3!CL:0000388;2.32e-11;3!CL:0002616;1.88e-09;1!CL:0000153;1.23e-08;9!CL:0000447;1.23e-08;9!CL:0000499;6.16e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,7.91e-12,3;CL:0000135,2.04e-11,3;CL:0000388,2.04e-11,3;CL:0002616,1.89e-09,1;CL:0000153,1.26e-08,9;CL:0000447,1.26e-08,9;CL:0000499,6.05e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.40e-09;1 | |||
|ontology_enrichment_disease=DOID:2394!2.12e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:6193;5.97e-09;1!DOID:2394;6.84e-09;14!DOID:120;5.96e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,4.19e-09,1;DOID:2394,6.85e-09,14;DOID:120,5.81e-07,27 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.33e-14;9!UBERON:0000042;3.33e-14;9!UBERON:0006915;7.90e-12;3!UBERON:0007616;7.90e-12;3!UBERON:0002217;7.90e-12;3!UBERON:0002018;7.90e-12;3!UBERON:0007846;2.32e-11;3!UBERON:0000043;2.32e-11;3!UBERON:0007845;2.32e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,7.91e-12,3;UBERON:0007616,7.91e-12,3;UBERON:0002217,7.91e-12,3;UBERON:0002018,7.91e-12,3;UBERON:0007846,2.04e-11,3;UBERON:0000043,2.04e-11,3;UBERON:0007845,2.04e-11,3;UBERON:0004457,1.13e-10,12;UBERON:0000042,1.13e-10,12 | |||
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| ||
|short_description=p11@SEMA3C | |||
}} | }} |
Latest revision as of 17:16, 19 September 2015
Short description: | p11@SEMA3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SEMA3C_5end |
Coexpression cluster: | C1439_Synoviocyte_Fibroblast_heart_mesenchymal_Chondrocyte_Hep2_Myoblast |
Association with transcript: | 448bp_to_D32000_5end |
EntrezGene: | SEMA3C |
HGNC: | 10725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 7.91e-12 | 3 |
fibrocyte | 2.04e-11 | 3 |
tendon cell | 2.04e-11 | 3 |
perirenal adipocyte cell | 1.89e-09 | 1 |
GAG secreting cell | 1.26e-08 | 9 |
carbohydrate secreting cell | 1.26e-08 | 9 |
stromal cell | 6.05e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 7.91e-12 | 3 |
layer of synovial tissue | 7.91e-12 | 3 |
synovial joint | 7.91e-12 | 3 |
synovial membrane of synovial joint | 7.91e-12 | 3 |
dense regular connective tissue | 2.04e-11 | 3 |
tendon | 2.04e-11 | 3 |
regular connective tissue | 2.04e-11 | 3 |
cavity lining | 1.13e-10 | 12 |
serous membrane | 1.13e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 4.19e-09 | 1 |
ovarian cancer | 6.85e-09 | 14 |
female reproductive organ cancer | 5.81e-07 | 27 |