FFCP PHASE1:Hg19::chr10:88729200..88729221,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79812 | |EntrezGene=79812 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19888 | |HGNC=19888 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000474994_5end | |association_with_transcript=16bp_to_ENST00000474994_5end | ||
|cluster_id=chr10:88729200..88729221,- | |||
|description=CAGE_peak_4_at_MMRN2_5end | |description=CAGE_peak_4_at_MMRN2_5end | ||
|id=chr10:88729200..88729221,- | |id=chr10:88729200..88729221,- | ||
|ontology_enrichment_celltype=CL:0000076!6.24e-07!62;CL:0002620!7.93e-07!23 | |ontology_enrichment_celltype=CL:0000076!6.24e-07!62;CL:0002620!7.93e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000240;2.46e-12;6!CL:0000311;2.46e-12;6!CL:0000079;2.46e-12;6!CL:0000237;2.46e-12;6!CL:0002327;1.15e-11;4!CL:0000575;9.46e-11;2!CL:0000312;8.36e-09;5!CL:0002159;3.73e-08;14!CL:0002582;7.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000240,1.91e-12,6;CL:0000311,1.91e-12,6;CL:0000079,1.91e-12,6;CL:0000237,1.91e-12,6;CL:0000036,1.91e-12,6;CL:0000357,1.91e-12,6;CL:0000114,1.91e-12,6;CL:0002327,1.08e-11,4;CL:0000575,9.55e-11,2;CL:0000076,1.62e-09,63;CL:0000312,1.03e-08,5;CL:0002159,4.21e-08,14;CL:0002077,2.11e-07,34;CL:0002582,7.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;2.46e-12;6!CL:0000114;2.46e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;9.66e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.15e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!6.67e-13!95;UBERON:0002199!1.18e-07!45;UBERON:0002416!1.18e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;1.15e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.08e-11,4;UBERON:0005333,1.08e-11,4;UBERON:0008425,1.08e-11,4;UBERON:0005311,1.08e-11,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.00267582127178,0.289693037921647,0,0,0,0,0,0.196468613246569,2.5500670180478,3.33705998505986,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,1.52054421143703,0.24406205754817,0.367663080345869,0,0,0.44905874525234,0,0,0,0,0,0,0.872188104285069,0,0.633152558322899,0.264818361626438,1.14734648299525,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.448346041655403,0,0,0.140450806702248,0.408308342509787,0,0,0,0,0,0.718618141816238,0.168336113954066,0,0.554128230968366,0,0.30648779579902,0,0.113432183160021,0.358779271377724,0,0.423863802319124,1.80054657650641,1.23663035086127,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0.201504196455281,0.508681776931463,0.773043412653187,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31700342490351,1.1240175325762,2.6137532827024,1.75918045801206,0,0,0,0,0,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0,0.425325291727159,4.92571874865666,6.39394664730716,2.68367875415648,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.925258162815933,1.24293207719189,1.64254312027618,1.03850885836724,0.464841513839837,0,0,0.644566922551274,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0.676695028044854,0,0,0,0,0.145016693914229,0,0.0890320356467374,0.330569830721956,0,0.255225424989168,0.4046311234222,0,0,0,0.308033580176089,0.532306030317022,0,0.55597265731176,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,1.46228093778771,0,0.136499911407986,0,0,0,0,0,0,0,0,1.239293992399,0.281695602532241,0,0,0.35667105148125,1.41904425628239,0.844430541190656,0,0.75894634753143,0,1.05844323998063,0.670302275535787,0,0.188287601553558,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.614321404198464,0,0.140669416410513,1.44701316529778,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0.520855522170466,0,0,1.2517279311405,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,1.53366118706464,0.384751292518985,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,1.21390189767046,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,1.37189356380129,0.957651272384428,0.698906672968121,1.0319161948297,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0.248505071130865,0.942776138467182,0.135904206073614,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.182248669974074,1.34173875039706,0,0,0,0,0,0,0,0,0.542999601753713,0,0.979762080328227,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0.124980407962107,0,0,1.6468607378872,0,0.724605143054126,0.597019211547496,0.233713309847224,3.32883516901568,0.568209015825267,0.251567901752575,0.889811221596536,0.228840068396924,0.302461847526478,0.310874401165561,0.591420599958536,0,0,0.155262956876259,1.65882483136342,1.06336685823198,0,0.150257608997218,0,0.813741466409323,0.181848659202559,0.214821114084977,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10463570151104,1.258915569475,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,1.46742878817343,0.577628330751691,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0.351742488719241,0,0.535701835878287,0,0,0.227662191351298,0.177404740325278,0,0.171488009437418,0,0,0,0.111231401892069,0.156986185701028,0,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,1.24329698497822,0,0.691259661814092,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0.196300467230486,0,0,0.718639647993729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0.352894871715692,0.0802413666891683,0,0,0,0,0.135982980381829,0,0,0,0,2.16313281061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| |phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.00267582127178,0.289693037921647,0,0,0,0,0,0.196468613246569,2.5500670180478,3.33705998505986,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,1.52054421143703,0.24406205754817,0.367663080345869,0,0,0.44905874525234,0,0,0,0,0,0,0.872188104285069,0,0.633152558322899,0.264818361626438,1.14734648299525,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.448346041655403,0,0,0.140450806702248,0.408308342509787,0,0,0,0,0,0.718618141816238,0.168336113954066,0,0.554128230968366,0,0.30648779579902,0,0.113432183160021,0.358779271377724,0,0.423863802319124,1.80054657650641,1.23663035086127,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0.201504196455281,0.508681776931463,0.773043412653187,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31700342490351,1.1240175325762,2.6137532827024,1.75918045801206,0,0,0,0,0,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0,0.425325291727159,4.92571874865666,6.39394664730716,2.68367875415648,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.925258162815933,1.24293207719189,1.64254312027618,1.03850885836724,0.464841513839837,0,0,0.644566922551274,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0.676695028044854,0,0,0,0,0.145016693914229,0,0.0890320356467374,0.330569830721956,0,0.255225424989168,0.4046311234222,0,0,0,0.308033580176089,0.532306030317022,0,0.55597265731176,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,1.46228093778771,0,0.136499911407986,0,0,0,0,0,0,0,0,1.239293992399,0.281695602532241,0,0,0.35667105148125,1.41904425628239,0.844430541190656,0,0.75894634753143,0,1.05844323998063,0.670302275535787,0,0.188287601553558,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.614321404198464,0,0.140669416410513,1.44701316529778,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0.520855522170466,0,0,1.2517279311405,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,1.53366118706464,0.384751292518985,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,1.21390189767046,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,1.37189356380129,0.957651272384428,0.698906672968121,1.0319161948297,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0.248505071130865,0.942776138467182,0.135904206073614,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.182248669974074,1.34173875039706,0,0,0,0,0,0,0,0,0.542999601753713,0,0.979762080328227,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0.124980407962107,0,0,1.6468607378872,0,0.724605143054126,0.597019211547496,0.233713309847224,3.32883516901568,0.568209015825267,0.251567901752575,0.889811221596536,0.228840068396924,0.302461847526478,0.310874401165561,0.591420599958536,0,0,0.155262956876259,1.65882483136342,1.06336685823198,0,0.150257608997218,0,0.813741466409323,0.181848659202559,0.214821114084977,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10463570151104,1.258915569475,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,1.46742878817343,0.577628330751691,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0.351742488719241,0,0.535701835878287,0,0,0.227662191351298,0.177404740325278,0,0.171488009437418,0,0,0,0.111231401892069,0.156986185701028,0,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,1.24329698497822,0,0.691259661814092,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0.196300467230486,0,0,0.718639647993729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0.352894871715692,0.0802413666891683,0,0,0,0,0.135982980381829,0,0,0,0,2.16313281061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| ||
|short_description=p4@MMRN2 | |short_description=p4@MMRN2 | ||
}} | }} |
Latest revision as of 18:20, 19 September 2015
Short description: | p4@MMRN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MMRN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000474994_5end |
EntrezGene: | MMRN2 |
HGNC: | 19888 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelial cell | 1.91e-12 | 6 |
keratin accumulating cell | 1.91e-12 | 6 |
stratified epithelial cell | 1.91e-12 | 6 |
keratinizing barrier epithelial cell | 1.91e-12 | 6 |
epithelial fate stem cell | 1.91e-12 | 6 |
stratified epithelial stem cell | 1.91e-12 | 6 |
surface ectodermal cell | 1.91e-12 | 6 |
mammary gland epithelial cell | 1.08e-11 | 4 |
corneal epithelial cell | 9.55e-11 | 2 |
squamous epithelial cell | 1.62e-09 | 63 |
keratinocyte | 1.03e-08 | 5 |
general ecto-epithelial cell | 4.21e-08 | 14 |
ecto-epithelial cell | 2.11e-07 | 34 |
visceral preadipocyte | 7.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.08e-11 | 4 |
mammary bud | 1.08e-11 | 4 |
mammary ridge | 1.08e-11 | 4 |
mammary placode | 1.08e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.15e-08 | 14 |