FFCP PHASE1:Hg19::chr18:52495622..52495633,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5874 | |EntrezGene=5874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9767 | |HGNC=9767 | ||
|TSSclassifier=strong | |||
|UniProt=O00194 | |UniProt=O00194 | ||
|association_with_transcript=-74bp_to_ENST00000262094,NM_004163_5end | |association_with_transcript=-74bp_to_ENST00000262094,NM_004163_5end | ||
|cluster_id=chr18:52495622..52495633,+ | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_3_at_RAB27B_5end | |description=CAGE_peak_3_at_RAB27B_5end | ||
|id=chr18:52495622..52495633,+ | |id=chr18:52495622..52495633,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.83e-15;5!CL:0000134;2.67e-11;55!CL:0000048;1.80e-09;58!CL:0000723;7.75e-09;61!CL:0000163;3.54e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.84e-15,5;CL:0002028,3.84e-15,5;CL:0000163,3.54e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.60e-10!14;DOID:193!6.04e-09!29;DOID:120!1.66e-08!27;DOID:14566!6.21e-08!239;DOID:162!7.05e-07!235 | |ontology_enrichment_disease=DOID:2394!4.60e-10!14;DOID:193!6.04e-09!29;DOID:120!1.66e-08!27;DOID:14566!6.21e-08!239;DOID:162!7.05e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.02e-26;14!DOID:120;1.26e-16;27!DOID:193;3.13e-15;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.61e-26,14;DOID:120,1.48e-16,27;DOID:193,3.65e-15,29;DOID:0050686,4.96e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0003100!4.31e-07!41 | |ontology_enrichment_uberon=UBERON:0003100!4.31e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;3.92e-16;13!UBERON:0002118;2.39e-14;5!UBERON:0002119;1.46e-11;4!UBERON:0000991;2.66e-11;21!UBERON:0003134;1.28e-09;33!UBERON:0003100;9.08e-08;41!UBERON:0000474;2.49e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,3.71e-16,13;UBERON:0002118,2.18e-14,5;UBERON:0002119,1.48e-11,4;UBERON:0000991,2.19e-11,21;UBERON:0009196,2.19e-11,21;UBERON:0009117,2.19e-11,21;UBERON:0005564,2.19e-11,21;UBERON:0004176,9.14e-11,22;UBERON:0003100,1.75e-09,41;UBERON:0003134,2.28e-09,37;UBERON:0000474,2.28e-09,37;UBERON:0005156,9.13e-09,59;UBERON:0000990,9.13e-09,59;UBERON:0003133,1.06e-07,48;UBERON:0002323,3.41e-07,46 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.495065411840187,0.662794751455832,2.6893005858071,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0,0.136874425072884,0,0,0,0,0,0.383829398097213,0,0.919421224478927,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616804496998528,0,0,0,0,0.445641827540694,0,0,0,0.128091319725675,0.520237390239513,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0.087834785693126,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,1.32409180813219,0.573673241497627,0,0,0,0.24666754841716,0.933633106199299,0.269421344139376,0.653847612453835,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0,0,0,0,0,0.245668634623536,0,0,0.247266929278557,0,0,0,0.125118519871964,0.277064115484183,0.877955241761676,0,0.600952235626387,0.113432183160021,0,0.213557388818567,0,0,0,0.257640540045629,0.37223371266318,0,0,0.252433774244115,0,0,0,0.302256294682921,0,0.773043412653187,0.818238361772504,0.573609190778008,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0.236613600079688,0.337169380156203,0.964044119533928,0.661763836394364,0,0.71181185733329,0.404493924480493,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0.857839051492628,0.219500570817251,0,0.201057944823262,0.370353780634118,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.839910640994298,1.13420077793909,0.358234090811393,1.16253575405585,0,8.86793828212698,13.2953135359971,7.25648404392702,6.77363781059719,5.30218220390796,0,0,0,0,0,0,0,0.112131084345361,0,0.66004457238855,0.387815147273333,0,0.845302752556,0.26593811658487,2.08014873822732,0,0,0,0,0,0,0,0,0,4.22015127883421,4.35766729300147,2.7992437530976,0,0,0,0.239624855491583,2.29723871668228,0,0.289562613335158,1.02738161275192,0.895304816199478,0.112085143993527,0.197030760201927,0.431255149719035,0,0,0,0,0,0,0,2.99161459204025,0.828831026872071,0.36807447515742,0,0,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0,0.347534457872331,0,0,0,0,0.213455115606889,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0.177561725313127,0.328508624055237,3.11552657510173,0.348631135379878,0.120859449591622,0,1.28913384510255,0.34444334449382,1.63882051206045,0.524497659837696,0,0.231046011313244,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0.165018999841176,0,0,1.6068392984416,0.096670718292122,0.462145851343933,0,0,0.322260734604821,0.435050081742686,0.681813019328807,0.0890320356467374,0.826424576804891,0.192190067365106,0.638063562472921,1.2138933702666,0.464845549297286,0.62962469366128,0,3.69640296211307,0.532306030317022,0.869932992075073,0.18532421910392,0.429374660225974,0.744316738719335,0,0.953150969619124,0,0,0.636406495851874,0,0.899362287916574,1.64722217841633,0.824686816419805,0.808729926293264,0,0,0,3.1682753652067,0,0,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0.655894752046633,0.202910376962704,0.30982349809975,0,1.14729081763241,0.196498082026242,0,0.354761064070598,0,0.329294892959902,0,0.349934720244983,0.48111056362756,0,0,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,2.29391162142713,0.569647187174163,0,0,0.648473311192717,0.540031437238115,0,0,0,0.490080431962063,0,0,0,0,3.5924286857907,2.68107518185313,3.38677732358213,0.324621940274555,0.842391534340376,0,0,5.01268954180134,1.35433422241283,0,0,0,1.03051603426729,0,0.223676107892416,0,1.56310476321632,3.61928026063815,0,0.811367035427949,0.66614393599564,0,0,0,0,0,0.568272293612826,1.19372242368845,0,0.614321404198464,0,0.281338832821026,0.779160935160341,0.329607748453519,0,0.19924798825107,0,0,0.409074730008619,0,0,0.898683511473268,1.43216939740487,0,0,0,0,0,0.278304294485554,0,0,0.787139999965761,0.724999575434793,0.227586896570999,0.762760950878299,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,1.11538995422883,0.230850775511391,1.25336261431701,0,0,0,0.31900115973192,0.274792780205587,0,0,1.56980256395025,0.166211681900156,0.225595660617181,0.392125068635479,0,0,0.476809736941136,0.210998064528027,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,7.52619176555688,0,0,0,0.063186579628488,0.300646838828985,0.311064574191741,0,0.330991955875499,0,0,0,0.416024019039416,0.347119476670262,0.293977192243133,0.435296032902013,0.17472666824203,0.51595809741485,0.580537987734511,0.730893170861856,0.410577285266046,0.484945082442097,1.412098027064,0.225980740780532,0.959293472527256,0,0.0633107959558787,0.195551382734803,1.76349404553374,0.213452994739353,0,0.144090417154106,0,0,0.288109595976299,0,1.17847017308398,0.135904206073614,0,0.305994652908965,0.86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| ||
|short_description=p3@RAB27B | |short_description=p3@RAB27B | ||
}} | }} |
Latest revision as of 20:13, 19 September 2015
Short description: | p3@RAB27B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAB27B_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | -74bp_to_ENST00000262094, NM_004163_5end |
EntrezGene: | RAB27B |
HGNC: | 9767 |
UniProt: | O00194 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.84e-15 | 5 |
basophil mast progenitor cell | 3.84e-15 | 5 |
endocrine cell | 3.54e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
female gonad | 3.71e-16 | 13 |
right ovary | 2.18e-14 | 5 |
left ovary | 1.48e-11 | 4 |
gonad | 2.19e-11 | 21 |
indifferent external genitalia | 2.19e-11 | 21 |
indifferent gonad | 2.19e-11 | 21 |
gonad primordium | 2.19e-11 | 21 |
external genitalia | 9.14e-11 | 22 |
female organism | 1.75e-09 | 41 |
female reproductive organ | 2.28e-09 | 37 |
female reproductive system | 2.28e-09 | 37 |
reproductive structure | 9.13e-09 | 59 |
reproductive system | 9.13e-09 | 59 |
reproductive organ | 1.06e-07 | 48 |
body cavity | 3.41e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.61e-26 | 14 |
female reproductive organ cancer | 1.48e-16 | 27 |
reproductive organ cancer | 3.65e-15 | 29 |
organ system cancer | 4.96e-07 | 137 |