FFCP PHASE1:Hg19::chr18:52495637..52495719,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5874 | |EntrezGene=5874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9767 | |HGNC=9767 | ||
|TSSclassifier=strong | |||
|UniProt=O00194 | |UniProt=O00194 | ||
|association_with_transcript=0bp_to_ENST00000262094,NM_004163_5end | |association_with_transcript=0bp_to_ENST00000262094,NM_004163_5end | ||
|cluster_id=chr18:52495637..52495719,+ | |||
|coexpression_cluster_id=C64 | |coexpression_cluster_id=C64 | ||
|description=CAGE_peak_1_at_RAB27B_5end | |description=CAGE_peak_1_at_RAB27B_5end | ||
|id=chr18:52495637..52495719,+ | |id=chr18:52495637..52495719,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.53e-07!14 | |ontology_enrichment_disease=DOID:2394!1.53e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;8.21e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.37e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.00e-12!169;UBERON:0000925!2.00e-12!169;UBERON:0006595!2.00e-12!169;UBERON:0001007!3.17e-11!155;UBERON:0001555!3.17e-11!155;UBERON:0007026!3.17e-11!155;UBERON:0001004!1.28e-09!72;UBERON:0004921!3.04e-09!129;UBERON:0004185!3.04e-09!129;UBERON:0003104!8.93e-09!238;UBERON:0009142!8.93e-09!238;UBERON:0000077!1.75e-08!130;UBERON:0000161!1.77e-07!35 | |ontology_enrichment_uberon=UBERON:0004119!2.00e-12!169;UBERON:0000925!2.00e-12!169;UBERON:0006595!2.00e-12!169;UBERON:0001007!3.17e-11!155;UBERON:0001555!3.17e-11!155;UBERON:0007026!3.17e-11!155;UBERON:0001004!1.28e-09!72;UBERON:0004921!3.04e-09!129;UBERON:0004185!3.04e-09!129;UBERON:0003104!8.93e-09!238;UBERON:0009142!8.93e-09!238;UBERON:0000077!1.75e-08!130;UBERON:0000161!1.77e-07!35 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.14e-10,160;UBERON:0000925,3.14e-10,160;UBERON:0006595,3.14e-10,160;UBERON:0001007,2.82e-09,145;UBERON:0001555,2.82e-09,145;UBERON:0007026,2.82e-09,145;UBERON:0001004,1.39e-08,74;UBERON:0004921,5.44e-08,118;UBERON:0000161,4.08e-07,36 | |||
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| ||
|short_description=p1@RAB27B | |short_description=p1@RAB27B | ||
}} | }} |
Latest revision as of 20:14, 19 September 2015
Short description: | p1@RAB27B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAB27B_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 0bp_to_ENST00000262094, NM_004163_5end |
EntrezGene: | RAB27B |
HGNC: | 9767 |
UniProt: | O00194 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.14e-10 | 160 |
endoderm | 3.14e-10 | 160 |
presumptive endoderm | 3.14e-10 | 160 |
digestive system | 2.82e-09 | 145 |
digestive tract | 2.82e-09 | 145 |
primitive gut | 2.82e-09 | 145 |
respiratory system | 1.39e-08 | 74 |
subdivision of digestive tract | 5.44e-08 | 118 |
orifice | 4.08e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.37e-08 | 14 |