FFCP PHASE1:Hg19::chr11:68518185..68518213,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9633 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7446 | |||
|TSSclassifier=strong | |||
|UniProt=Q6PHY4 | |||
|association_with_transcript=-18bp_to_uc001ooe.2_5end | |||
|cluster_id=chr11:68518185..68518213,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_3_at_MTL5_5end | |||
|id=chr11:68518185..68518213,- | |||
|ontology_enrichment_celltype=CL:0000039!5.07e-36!7;CL:0000586!5.07e-36!7;CL:0002322!3.36e-35!5;CL:0000540!3.42e-19!6;CL:0000031!3.42e-19!6;CL:0000404!3.42e-19!6;CL:0000047!1.92e-14!8;CL:0000148!1.72e-11!10;CL:0000541!1.72e-11!10;CL:0000147!3.06e-08!14;CL:0000133!6.25e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.89e-63;7!CL:0000586;4.89e-63;7!CL:0002322;2.83e-61;5!CL:0002321;1.58e-20;15!CL:0000148;6.69e-20;10!CL:0000540;1.07e-19;6!CL:0000404;1.07e-19;6!CL:0000147;2.61e-14;14!CL:0000710;4.25e-10;20!CL:0002535;9.55e-08;2!CL:0000075;1.56e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.16e-63,7;CL:0000586,5.16e-63,7;CL:0002322,3.01e-61,5;CL:0000148,6.22e-20,10;CL:0000541,6.22e-20,10;CL:0000540,1.10e-19,6;CL:0000031,1.10e-19,6;CL:0000404,1.10e-19,6;CL:0000047,6.33e-15,8;CL:0000147,2.47e-14,14;CL:0000710,4.10e-10,20;CL:0000133,1.92e-09,59;CL:0002535,9.25e-08,2;CL:0000221,1.13e-07,72;CL:0000075,1.52e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.36e-20;10!UBERON:0005564;2.36e-20;10!CL:0000031;1.07e-19;6 | |||
|ontology_enrichment_disease=DOID:3095!3.92e-11!22;DOID:2994!3.92e-11!22;DOID:1799!5.07e-08!1;DOID:10165!5.07e-08!1;DOID:1798!5.07e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.79e-20;22!DOID:2994;5.79e-20;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.89e-20,22;DOID:2994,5.89e-20,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.88e-31!8;UBERON:0003135!3.20e-30!11;UBERON:0003101!1.01e-14!22;UBERON:0000079!1.01e-14!22;UBERON:0000991!1.57e-11!21;UBERON:0009196!1.57e-11!21;UBERON:0009117!1.57e-11!21;UBERON:0005564!1.57e-11!21;UBERON:0004176!5.53e-11!22;UBERON:0003133!3.13e-08!48;UBERON:0001000!4.11e-08!1;UBERON:0005352!4.11e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.40e-25;8!UBERON:0003135;1.56e-18;11!UBERON:0000922;2.22e-12;49!UBERON:0000991;7.74e-10;21!UBERON:0003101;2.12e-09;22!UBERON:0000079;2.12e-09;22!UBERON:0006955;9.55e-08;2!UBERON:0004801;9.55e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.32e-25,8;UBERON:0003135,1.52e-18,11;UBERON:0000991,7.65e-10,21;UBERON:0009196,7.65e-10,21;UBERON:0009117,7.65e-10,21;UBERON:0005564,7.65e-10,21;UBERON:0004176,2.10e-09,22;UBERON:0003101,2.10e-09,22;UBERON:0000079,2.10e-09,22;UBERON:0006955,9.25e-08,2;UBERON:0004801,9.25e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2448693635726,5.16866096453793,6.9716365721711,3.21349270547648,4.79409616663694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,15.8717631148194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1528195219403,0,1.3037684630641,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6097077986913,15.1293380256957,10.3860084507296,0,0,0,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,7.2412069116807,5.87878291584233,11.2111777432511,6.51839602160175,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@MTL5 | |||
}} |
Latest revision as of 20:28, 19 September 2015
Short description: | p3@MTL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MTL5_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -18bp_to_uc001ooe.2_5end |
EntrezGene: | MTL5 |
HGNC: | 7446 |
UniProt: | Q6PHY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.16e-63 | 7 |
germ cell | 5.16e-63 | 7 |
embryonic stem cell | 3.01e-61 | 5 |
melanocyte | 6.22e-20 | 10 |
melanoblast | 6.22e-20 | 10 |
neuron | 1.10e-19 | 6 |
neuroblast | 1.10e-19 | 6 |
electrically signaling cell | 1.10e-19 | 6 |
neuronal stem cell | 6.33e-15 | 8 |
pigment cell | 2.47e-14 | 14 |
neurecto-epithelial cell | 4.10e-10 | 20 |
neurectodermal cell | 1.92e-09 | 59 |
epithelial cell of cervix | 9.25e-08 | 2 |
ectodermal cell | 1.13e-07 | 72 |
columnar/cuboidal epithelial cell | 1.52e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
testis | 2.32e-25 | 8 |
male reproductive organ | 1.52e-18 | 11 |
gonad | 7.65e-10 | 21 |
indifferent external genitalia | 7.65e-10 | 21 |
indifferent gonad | 7.65e-10 | 21 |
gonad primordium | 7.65e-10 | 21 |
external genitalia | 2.10e-09 | 22 |
male organism | 2.10e-09 | 22 |
male reproductive system | 2.10e-09 | 22 |
uterine epithelium | 9.25e-08 | 2 |
cervix epithelium | 9.25e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.89e-20 | 22 |
germ cell cancer | 5.89e-20 | 22 |