FFCP PHASE1:Hg19::chr3:119500891..119500904,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8856 | |EntrezGene=8856 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7968 | |HGNC=7968 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_ENST00000474090_5end | |||
|cluster_id=chr3:119500891..119500904,+ | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_2_at_NR1I2_5end | |||
|id=chr3:119500891..119500904,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.15e-19!12;CL:0000417!4.15e-19!12;CL:0000668!4.15e-19!12;CL:0000414!4.15e-19!12;CL:0000412!4.15e-19!12;CL:0000182!4.15e-19!12;CL:0000223!8.26e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.59e-27;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.60e-27,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.28e-29;11!UBERON:0009497;4.37e-25;13!UBERON:0006242;2.25e-14;1!UBERON:0003104;3.64e-10;31!UBERON:0001041;2.97e-07;30 | |||
|ontology_enrichment_disease=DOID:178!3.96e-10!1;DOID:326!3.96e-10!1;DOID:3978!3.96e-10!1;DOID:3394!3.96e-10!1;DOID:5844!3.96e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.63e-25!27;UBERON:0005409!4.64e-19!35;UBERON:0009854!8.23e-19!23;UBERON:0009497!2.44e-17!25;UBERON:0000015!2.44e-17!25;UBERON:0002423!2.44e-17!25;UBERON:0006235!2.44e-17!25;UBERON:0004161!2.44e-17!25;UBERON:0002107!4.60e-17!19;UBERON:0006925!4.60e-17!19;UBERON:0008836!4.60e-17!19;UBERON:0009856!1.46e-16!26;UBERON:0001155!2.26e-16!9;UBERON:0008835!1.11e-14!22;UBERON:0003894!1.11e-14!22;UBERON:0000059!1.94e-13!11;UBERON:0004921!2.92e-13!129;UBERON:0004185!2.92e-13!129;UBERON:0007499!7.21e-13!25;UBERON:0005057!2.34e-12!26;UBERON:0001007!2.67e-12!155;UBERON:0001555!2.67e-12!155;UBERON:0007026!2.67e-12!155;UBERON:0004119!4.58e-11!169;UBERON:0000925!4.58e-11!169;UBERON:0006595!4.58e-11!169;UBERON:0002365!2.73e-10!31;UBERON:0002330!2.73e-10!31;UBERON:0001154!3.29e-10!1;UBERON:0001153!3.29e-10!1;UBERON:0002108!6.13e-10!14;UBERON:0003929!7.60e-10!54;UBERON:0000949!3.07e-09!45;UBERON:0002368!4.62e-09!35;UBERON:0005172!1.77e-07!55;UBERON:0005173!1.77e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;2.47e-25;25!UBERON:0002107;8.58e-25;19!UBERON:0006925;8.58e-25;19!UBERON:0002108;1.41e-24;4!UBERON:0000160;1.85e-18;17!UBERON:0002365;1.02e-14;31!UBERON:0002330;1.02e-14;31!UBERON:0005409;1.87e-14;22!UBERON:0002368;3.86e-12;33!UBERON:0000949;5.31e-10;43!UBERON:0001007;3.51e-09;81!UBERON:0004921;7.43e-09;33!UBERON:0005172;4.83e-07;52!UBERON:0005173;4.83e-07;52!UBERON:0001155;7.87e-07;9!UBERON:0002417;8.17e-07;58!UBERON:0000916;8.17e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,2.25e-25,25;UBERON:0000015,2.25e-25,25;UBERON:0002423,2.25e-25,25;UBERON:0006235,2.25e-25,25;UBERON:0004161,2.25e-25,25;UBERON:0002107,8.58e-25,19;UBERON:0006925,8.58e-25,19;UBERON:0008836,8.58e-25,19;UBERON:0002108,1.79e-24,4;UBERON:0008835,2.18e-21,22;UBERON:0003894,2.18e-21,22;UBERON:0009854,1.89e-20,23;UBERON:0007499,8.48e-19,25;UBERON:0000160,1.99e-18,17;UBERON:0009856,4.57e-18,26;UBERON:0002365,4.09e-15,31;UBERON:0002330,4.09e-15,31;UBERON:0002368,2.34e-13,35;UBERON:0005409,9.16e-13,25;UBERON:0004921,3.17e-12,118;UBERON:0001007,1.08e-11,145;UBERON:0001555,1.08e-11,145;UBERON:0007026,1.08e-11,145;UBERON:0003929,1.73e-11,54;UBERON:0005172,1.73e-11,54;UBERON:0005173,1.73e-11,54;UBERON:0004119,1.81e-10,160;UBERON:0000925,1.81e-10,160;UBERON:0006595,1.81e-10,160;UBERON:0000949,2.52e-10,45;UBERON:0002417,2.77e-10,60;UBERON:0000916,2.77e-10,60;UBERON:0002530,8.54e-08,59;UBERON:0005911,2.28e-07,82;UBERON:0011216,5.62e-07,223;UBERON:0001155,7.64e-07,9 | |||
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|short_description=p2@NR1I2 | |||
}} | }} |
Latest revision as of 21:15, 19 September 2015
Short description: | p2@NR1I2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NR1I2_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | 9bp_to_ENST00000474090_5end |
EntrezGene: | NR1I2 |
HGNC: | 7968 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.60e-27 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 2.25e-25 | 25 |
anatomical boundary | 2.25e-25 | 25 |
hepatobiliary system | 2.25e-25 | 25 |
foregut-midgut junction | 2.25e-25 | 25 |
septum transversum | 2.25e-25 | 25 |
liver | 8.58e-25 | 19 |
digestive gland | 8.58e-25 | 19 |
liver bud | 8.58e-25 | 19 |
small intestine | 1.79e-24 | 4 |
hepatic diverticulum | 2.18e-21 | 22 |
liver primordium | 2.18e-21 | 22 |
digestive tract diverticulum | 1.89e-20 | 23 |
epithelial sac | 8.48e-19 | 25 |
intestine | 1.99e-18 | 17 |
sac | 4.57e-18 | 26 |
exocrine gland | 4.09e-15 | 31 |
exocrine system | 4.09e-15 | 31 |
endocrine gland | 2.34e-13 | 35 |
gastrointestinal system | 9.16e-13 | 25 |
subdivision of digestive tract | 3.17e-12 | 118 |
digestive system | 1.08e-11 | 145 |
digestive tract | 1.08e-11 | 145 |
primitive gut | 1.08e-11 | 145 |
gut epithelium | 1.73e-11 | 54 |
abdomen element | 1.73e-11 | 54 |
abdominal segment element | 1.73e-11 | 54 |
endoderm-derived structure | 1.81e-10 | 160 |
endoderm | 1.81e-10 | 160 |
presumptive endoderm | 1.81e-10 | 160 |
endocrine system | 2.52e-10 | 45 |
abdominal segment of trunk | 2.77e-10 | 60 |
abdomen | 2.77e-10 | 60 |
gland | 8.54e-08 | 59 |
endo-epithelium | 2.28e-07 | 82 |
organ system subdivision | 5.62e-07 | 223 |
colon | 7.64e-07 | 9 |