FFCP PHASE1:Hg19::chr1:202936357..202936392,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:202936357..202936392,- to FFCP PHASE1:Hg19::chr1:202936357..202936392,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51706 | |EntrezGene=51706 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13397 | |HGNC=13397 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000482572_5end | |||
|cluster_id=chr1:202936357..202936392,- | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_1_at_CYB5R1_5end | |||
|id=chr1:202936357..202936392,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;7.20e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.90e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.75e-13!659;UBERON:0000480!4.21e-12!626;UBERON:0000467!9.81e-12!625;UBERON:0000475!1.30e-09!365;UBERON:0005631!2.66e-09!14;UBERON:0000158!2.66e-09!14;UBERON:0007023!4.08e-09!115;UBERON:0000923!8.73e-08!604;UBERON:0005291!8.73e-08!604;UBERON:0006598!8.73e-08!604;UBERON:0002532!8.73e-08!604;UBERON:0002050!1.39e-07!605;UBERON:0005423!1.39e-07!605;UBERON:0000062!2.42e-07!511;UBERON:0002100!5.85e-07!216;UBERON:0000486!7.55e-07!82;UBERON:0000922!9.12e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;8.29e-07;10!UBERON:0000158;8.29e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.65e-09,114;UBERON:0005631,2.66e-09,14;UBERON:0000158,2.66e-09,14;UBERON:0002050,5.08e-08,564;UBERON:0000923,7.86e-08,560;UBERON:0010316,7.86e-08,560;UBERON:0005291,7.86e-08,560;UBERON:0006598,7.86e-08,560;UBERON:0010317,7.86e-08,560;UBERON:0002532,7.86e-08,560;UBERON:0005423,1.99e-07,581 | |||
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| ||
|short_description=p1@CYB5R1 | |||
}} | }} |
Latest revision as of 21:18, 19 September 2015
Short description: | p1@CYB5R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYB5R1_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000482572_5end |
EntrezGene: | CYB5R1 |
HGNC: | 13397 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.90e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.65e-09 | 114 |
extraembryonic membrane | 2.66e-09 | 14 |
membranous layer | 2.66e-09 | 14 |
embryonic structure | 5.08e-08 | 564 |
germ layer | 7.86e-08 | 560 |
germ layer / neural crest | 7.86e-08 | 560 |
embryonic tissue | 7.86e-08 | 560 |
presumptive structure | 7.86e-08 | 560 |
germ layer / neural crest derived structure | 7.86e-08 | 560 |
epiblast (generic) | 7.86e-08 | 560 |
developing anatomical structure | 1.99e-07 | 581 |