FFCP PHASE1:Hg19::chr22:32188649..32188663,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9681 | |EntrezGene=9681 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18423 | |HGNC=18423 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000473802_5end | |association_with_transcript=-9bp_to_ENST00000473802_5end | ||
|cluster_id=chr22:32188649..32188663,+ | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_5_at_DEPDC5_5end | |description=CAGE_peak_5_at_DEPDC5_5end | ||
|id=chr22:32188649..32188663,+ | |id=chr22:32188649..32188663,+ | ||
|ontology_enrichment_celltype=CL:0000236!1.32e-35!14;CL:0000945!2.38e-30!24;CL:0000826!2.38e-30!24;CL:0000738!3.91e-16!140;CL:0000037!5.34e-16!172;CL:0000566!5.34e-16!172;CL:0002031!6.11e-15!124;CL:0002032!1.10e-14!165;CL:0000837!1.10e-14!165;CL:0000988!1.19e-14!182;CL:0000542!1.88e-13!53;CL:0000051!1.88e-13!53;CL:0002087!6.28e-13!119;CL:0002274!1.54e-12!5;CL:0000457!1.54e-12!5;CL:0002191!1.54e-12!5;CL:0000097!1.54e-12!5;CL:0000831!1.54e-12!5;CL:0002028!1.54e-12!5;CL:0000838!5.59e-12!52;CL:0000163!6.17e-07!9 | |ontology_enrichment_celltype=CL:0000236!1.32e-35!14;CL:0000945!2.38e-30!24;CL:0000826!2.38e-30!24;CL:0000738!3.91e-16!140;CL:0000037!5.34e-16!172;CL:0000566!5.34e-16!172;CL:0002031!6.11e-15!124;CL:0002032!1.10e-14!165;CL:0000837!1.10e-14!165;CL:0000988!1.19e-14!182;CL:0000542!1.88e-13!53;CL:0000051!1.88e-13!53;CL:0002087!6.28e-13!119;CL:0002274!1.54e-12!5;CL:0000457!1.54e-12!5;CL:0002191!1.54e-12!5;CL:0000097!1.54e-12!5;CL:0000831!1.54e-12!5;CL:0002028!1.54e-12!5;CL:0000838!5.59e-12!52;CL:0000163!6.17e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.49e-86;13!CL:0000945;5.16e-46;24!CL:0000097;4.90e-27;5!CL:0000542;3.41e-18;53!CL:0000163;3.98e-15;9!CL:0000785;1.76e-09;1!CL:0000819;1.76e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.96e-80,14;CL:0000945,3.99e-46,24;CL:0000826,3.99e-46,24;CL:0000097,5.25e-27,5;CL:0002028,5.25e-27,5;CL:0000542,3.00e-23,53;CL:0000051,3.00e-23,53;CL:0000838,3.32e-20,52;CL:0000738,6.01e-18,136;CL:0002031,2.79e-16,120;CL:0000163,4.13e-15,9;CL:0002032,1.17e-14,161;CL:0000837,1.17e-14,161;CL:0000037,6.57e-14,168;CL:0000988,4.93e-13,177;CL:0002087,5.40e-11,115;CL:0000819,1.43e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000051;3.41e-18;53!UBERON:0001045;3.67e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;1.76e-09;1!DOID:8675;1.76e-09;1!DOID:12603;3.67e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.43e-09,1;DOID:8675,1.43e-09,1;DOID:12603,5.28e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.08e-10!112;UBERON:0002390!2.20e-09!102;UBERON:0003061!2.20e-09!102;UBERON:0000178!1.04e-07!15;UBERON:0000179!1.04e-07!15;UBERON:0000463!1.04e-07!15 | |ontology_enrichment_uberon=UBERON:0002193!3.08e-10!112;UBERON:0002390!2.20e-09!102;UBERON:0003061!2.20e-09!102;UBERON:0000178!1.04e-07!15;UBERON:0000179!1.04e-07!15;UBERON:0000463!1.04e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.67e-09;1!UBERON:0001154;3.67e-09;1!UBERON:0001153;3.67e-09;1!UBERON:0009854;3.67e-09;1!UBERON:0001961;3.67e-09;1!UBERON:0001744;3.67e-09;1!UBERON:0001042;3.67e-09;1!UBERON:0001735;3.67e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,3.00e-09,1;UBERON:0001961,3.00e-09,1;UBERON:0001744,3.00e-09,1;UBERON:0001735,3.00e-09,1;UBERON:0001154,3.53e-09,1;UBERON:0001153,3.53e-09,1;UBERON:0001045,3.53e-09,1 | |||
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| ||
|short_description=p5@DEPDC5 | |short_description=p5@DEPDC5 | ||
}} | }} |
Latest revision as of 21:18, 19 September 2015
Short description: | p5@DEPDC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DEPDC5_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -9bp_to_ENST00000473802_5end |
EntrezGene: | DEPDC5 |
HGNC: | 18423 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.96e-80 | 14 |
lymphocyte of B lineage | 3.99e-46 | 24 |
pro-B cell | 3.99e-46 | 24 |
mast cell | 5.25e-27 | 5 |
basophil mast progenitor cell | 5.25e-27 | 5 |
lymphocyte | 3.00e-23 | 53 |
common lymphoid progenitor | 3.00e-23 | 53 |
lymphoid lineage restricted progenitor cell | 3.32e-20 | 52 |
leukocyte | 6.01e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 2.79e-16 | 120 |
endocrine cell | 4.13e-15 | 9 |
hematopoietic oligopotent progenitor cell | 1.17e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.17e-14 | 161 |
hematopoietic stem cell | 6.57e-14 | 168 |
hematopoietic cell | 4.93e-13 | 177 |
nongranular leukocyte | 5.40e-11 | 115 |
B-1 B cell | 1.43e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
tonsil | 3.00e-09 | 1 |
mucosa-associated lymphoid tissue | 3.00e-09 | 1 |
lymphoid tissue | 3.00e-09 | 1 |
tonsillar ring | 3.00e-09 | 1 |
vermiform appendix | 3.53e-09 | 1 |
caecum | 3.53e-09 | 1 |
midgut | 3.53e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.43e-09 | 1 |
lymphosarcoma | 1.43e-09 | 1 |
acute leukemia | 5.28e-09 | 1 |