FFCP PHASE1:Hg19::chr5:1201575..1201595,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340024 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27960 | |||
|TSSclassifier=strong | |||
|UniProt=Q695T7,E9PD72 | |||
|association_with_transcript=-114bp_to_ENST00000304460,ENST00000515652,NM_001003841,uc003jbw.3_5end | |||
|cluster_id=chr5:1201575..1201595,+ | |||
|coexpression_cluster_id=C266 | |||
|description=CAGE_peak_3_at_SLC6A19_5end | |||
|id=chr5:1201575..1201595,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.46e-18!7;CL:0000586!1.46e-18!7;CL:0000764!2.06e-11!2;CL:0000765!2.06e-11!2;CL:0000050!2.06e-11!2;CL:0000038!2.06e-11!2;CL:0000558!2.06e-11!2;CL:0000547!2.06e-11!2;CL:0000549!2.06e-11!2;CL:0000550!2.06e-11!2;CL:0000552!2.06e-11!2;CL:0002322!1.44e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.48e-09;7!CL:0000586;4.48e-09;7!CL:0002535;2.87e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.57e-09,7;CL:0000586,4.57e-09,7;CL:0002535,3.08e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;8.63e-16;1 | |||
|ontology_enrichment_disease=DOID:1036!4.90e-16!8;DOID:8692!3.17e-15!31;DOID:1240!1.02e-11!39;DOID:2531!2.62e-10!51;DOID:0060083!2.62e-10!51;DOID:8552!7.77e-07!1;DOID:1799!9.67e-07!1;DOID:10165!9.67e-07!1;DOID:1798!9.67e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.66e-15;1!DOID:10165;1.66e-15;1!DOID:1798;1.66e-15;1!DOID:8552;1.66e-15;1!DOID:8692;6.49e-12;31!DOID:1240;3.67e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,1.34e-15,1;DOID:1799,2.38e-15,1;DOID:10165,2.38e-15,1;DOID:1798,2.38e-15,1;DOID:8692,1.49e-11,31;DOID:1240,3.54e-09,39;DOID:2531,5.31e-07,51;DOID:0060083,5.31e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;7.17e-26;4!UBERON:0006955;2.87e-08;2!UBERON:0004801;2.87e-08;2!UBERON:0000160;1.25e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,6.59e-26,4;UBERON:0006955,3.08e-08,2;UBERON:0004801,3.08e-08,2;UBERON:0000160,1.22e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9316198248765,4.92349595790849,0.270455678475983,0,2.81974010175699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22522541847762,0.359030577639089,1.73835795075213,0,0,0,0,0,2.6593869104025,0.225595660617181,0.588187602953219,0.335643173951685,2.46679852541441,0.794682894901893,0,0,0,0,0,0.619202951523374,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,5.12287187374446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.59464126148817,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3571602503328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609589624911347,0,0,0,0,0,0,0,0,0,0,1.85217979459067,2.62271472604749,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0.730336388246517,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0.407955318967927,0,0.275684698604535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@SLC6A19 | |||
}} |
Latest revision as of 22:48, 19 September 2015
Short description: | p3@SLC6A19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC6A19_5end |
Coexpression cluster: | C266_acute_chronic_leukemia_small_choriocarcinoma_hepatoma_Mast |
Association with transcript: | -114bp_to_ENST00000304460, ENST00000515652, NM_001003841, uc003jbw.3_5end |
EntrezGene: | SLC6A19 |
HGNC: | 27960 |
UniProt: | Q695T7E9PD72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.57e-09 | 7 |
germ cell | 4.57e-09 | 7 |
epithelial cell of cervix | 3.08e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 6.59e-26 | 4 |
uterine epithelium | 3.08e-08 | 2 |
cervix epithelium | 3.08e-08 | 2 |
intestine | 1.22e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 1.34e-15 | 1 |
islet cell tumor | 2.38e-15 | 1 |
endocrine pancreas cancer | 2.38e-15 | 1 |
pancreatic endocrine carcinoma | 2.38e-15 | 1 |
myeloid leukemia | 1.49e-11 | 31 |
leukemia | 3.54e-09 | 39 |
hematologic cancer | 5.31e-07 | 51 |
immune system cancer | 5.31e-07 | 51 |