FFCP PHASE1:Hg19::chr1:203317353..203317375,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:203317353..203317375,-
|short_description=p3@FMOD
|description=CAGE_peak_3_at_FMOD_5end
|association_with_transcript=-13bp_to_ENST00000539467_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2331 | |EntrezGene=2331 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3774 | |HGNC=3774 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2B3 | |UniProt=F5H2B3 | ||
|association_with_transcript=-13bp_to_ENST00000539467_5end | |||
|cluster_id=chr1:203317353..203317375,- | |||
|coexpression_cluster_id=C546 | |||
|description=CAGE_peak_3_at_FMOD_5end | |||
|id=chr1:203317353..203317375,- | |||
|ontology_enrichment_celltype=CL:0000136!6.89e-12!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;9.91e-25;13!CL:0000153;2.45e-12;9!CL:0000447;2.45e-12;9!CL:0000138;5.31e-10;6!CL:0002615;1.61e-08;3!CL:0000499;1.12e-07;28!CL:0002579;1.45e-07;3!CL:0000135;1.79e-07;3!CL:0000388;1.79e-07;3!CL:0000327;6.71e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.67e-21,15;CL:0000153,2.93e-12,9;CL:0000447,2.93e-12,9;CL:0000058,7.05e-10,6;CL:0000138,7.05e-10,6;CL:0002615,1.76e-08,3;CL:0002579,1.19e-07,3;CL:0000499,1.27e-07,28;CL:0000135,1.99e-07,3;CL:0000388,1.99e-07,3;CL:0000327,7.40e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.32e-16!115;UBERON:0004457!4.56e-08!12;UBERON:0000042!4.56e-08!12;UBERON:0003688!9.67e-08!6;UBERON:0002358!9.67e-08!6;UBERON:0003684!9.67e-08!6;UBERON:0001178!9.67e-08!6;UBERON:0004458!7.30e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.86e-16;9!UBERON:0000042;2.86e-16;9!UBERON:0003688;2.16e-14;6!UBERON:0002358;2.16e-14;6!UBERON:0003684;2.16e-14;6!UBERON:0001178;2.16e-14;6!UBERON:0003978;5.90e-08;3!UBERON:0000946;5.90e-08;3!UBERON:0007846;1.79e-07;3!UBERON:0000043;1.79e-07;3!UBERON:0007845;1.79e-07;3!UBERON:0001443;2.70e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.91e-14,6;UBERON:0002358,1.91e-14,6;UBERON:0003684,1.91e-14,6;UBERON:0001178,1.91e-14,6;UBERON:0004457,7.64e-12,12;UBERON:0000042,7.64e-12,12;UBERON:0007023,1.08e-09,114;UBERON:0003978,6.72e-08,3;UBERON:0009751,6.72e-08,3;UBERON:0000946,6.72e-08,3;UBERON:0002523,6.72e-08,3;UBERON:0005983,6.72e-08,3;UBERON:0002165,6.72e-08,3;UBERON:0002062,6.72e-08,3;UBERON:0007280,6.72e-08,3;UBERON:0007846,1.99e-07,3;UBERON:0000043,1.99e-07,3;UBERON:0007845,1.99e-07,3;UBERON:0001443,2.93e-07,11 | |||
|phase1_expression=7.08545679155171,7.27941781229343,10.8534891153898,7.00513088471913,19.6662881548007,7.85104671690332,0,1.89515962028049,2.87304191019822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,1.0843174571537,4.51204119572301,5.64901423947212,15.1104329939709,43.3105034569346,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.25326102332916,0,1.43418310374407,0.354668382198357,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,1.48360157567134,0,0,0,0,0,0,0,1.95309476578576,0.226864366320042,0.358779271377724,0.640672166455702,0.635795703478686,0.300091096084402,0,0,0.37223371266318,0,0.194874010322397,0,0.184099797284599,2.26304479546337,0,0.302256294682921,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0.491953754172454,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0.646358578788889,0,0,1.32969058292435,0,0,0,0,1.42977993658148,0,0,0,0.355391948742546,0,0.904318131178758,0,0.099972991182057,0,0,0,0.479249710983165,4.59447743336456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0.356857977594324,0.946214490203608,1.05427273493442,0.601892199455438,4.5481500811197,4.1389228517002,0,0,0.173767228936166,0,0,0,0,0,0,0,0,4.21783273291921,0.920771839728375,2.80660094433074,8.96974044789907,1.53512174720011,4.66476371316462,1.48418066444991,0,0.177561725313127,0,0,0.116210378459959,0.846016147141356,0.40101294060657,0,0.229628896329213,0,1.44236856455367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0.290033387828457,0,0.0890320356467374,0,0.192190067365106,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,7.38876723541824,3.95153871551882,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0,0,0,0,0,0,0,0,6.97367958878744,1.65770349318689,0,0.102268682502155,0,3.42143546427988,0,0,0,1.7755813014648,0,0,0,0.0927680981618513,0,0,0,4.34999745260876,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,2.84715956464049,0,0,0,0,0.638002319463839,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.442287822516696,1.83309043480088,0,0,0,0,5.61804353109152,0,0,0.19566461893209,0,1.18375320854817,6.04953580243319,0,4.42306057399416,0,0,0,0,0,0,0,0,0,0,0,3.66926003308263,0,0,0,0,0.581934098930517,0,4.06765333404958,0,0,0,0,0,7.25740182113799,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,14.8019672674295,3.20824593616357,4.30723814746088,0,0.858452096273142,1.33902874465124,0.403100834920358,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0.314727528809989,0,0.179287339332845,0,5.71756261098694,0,0,0,1.72844298240254,0.326587360109409,0,0.082092520749339,0,0,0.293104467356165,0,0.129282956361551,0,0,0,0.427149650270779,0.157204305099666,3.31391244277756,2.97699613087171,0.395223263795889,0,0,3.80812462358632,4.7631079864313,11.947477493775,9.18043365987452,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0.50313580350515,0,0,0.604923695052956,0,0,0,0,0.155262956876259,0.414706207840855,0,0,1.50257608997218,0,0.406870733204662,0,0.322231671127465,0.464033759878494,1.19428766609585,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0.345430341731199,0,0,0.389720617678777,0.132864840313363,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850299680406731,0.371807292777007,0,0,0,0,0,0,0.128458450192919,0,0,0,0.252071696221718,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,1.98916222116275,3.61009576076435,0.20170506870352,3.12605604493237,0,0,0,0,0,0,0.0634158101939068,0,1.09651553371436,2.48105589194647,0,0,0,0,0,0.91064876540519,0.266107110487916,0.115233987555779,0.171488009437418,0.0679697329768317,0.0657727735628491,0,0,1.64835494986079,0,0,0,0,0,0.929195074296532,0,0,0,0.801711364730253,0.207216164163037,0.17071847709395,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0.718639647993729,4.6392577253528,7.77137588894623,0,0,0,0,0,0.150962843566674,0.308696632431779,2.62271472604749,0,1.22574160876953,0,0.981542335574726,0,3.3812458206672,0.509781344063451,0.281951753939561,0.193373663920732,0,0,0,0,1.46067277649303,1.37618785021362,0,0,0.0679914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| ||
|short_description=p3@FMOD | |||
}} | }} |
Latest revision as of 23:09, 19 September 2015
Short description: | p3@FMOD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FMOD_5end |
Coexpression cluster: | C546_Chondrocyte_heart_mature_Adipocyte_teratocarcinoma_aorta_dura |
Association with transcript: | -13bp_to_ENST00000539467_5end |
EntrezGene: | FMOD |
HGNC: | 3774 |
UniProt: | F5H2B3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.67e-21 | 15 |
GAG secreting cell | 2.93e-12 | 9 |
carbohydrate secreting cell | 2.93e-12 | 9 |
chondroblast | 7.05e-10 | 6 |
chondrocyte | 7.05e-10 | 6 |
adipocyte of omentum tissue | 1.76e-08 | 3 |
omentum preadipocyte | 1.19e-07 | 3 |
stromal cell | 1.27e-07 | 28 |
fibrocyte | 1.99e-07 | 3 |
tendon cell | 1.99e-07 | 3 |
extracellular matrix secreting cell | 7.40e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.91e-14 | 6 |
peritoneum | 1.91e-14 | 6 |
abdominal cavity | 1.91e-14 | 6 |
visceral peritoneum | 1.91e-14 | 6 |
cavity lining | 7.64e-12 | 12 |
serous membrane | 7.64e-12 | 12 |
adult organism | 1.08e-09 | 114 |
valve | 6.72e-08 | 3 |
cardiac mesenchyme | 6.72e-08 | 3 |
cardial valve | 6.72e-08 | 3 |
tunica intima | 6.72e-08 | 3 |
heart layer | 6.72e-08 | 3 |
endocardium | 6.72e-08 | 3 |
endocardial cushion | 6.72e-08 | 3 |
presumptive endocardium | 6.72e-08 | 3 |
dense regular connective tissue | 1.99e-07 | 3 |
tendon | 1.99e-07 | 3 |
regular connective tissue | 1.99e-07 | 3 |
chest | 2.93e-07 | 11 |