FFCP PHASE1:Hg19::chr18:55888551..55888595,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23327 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7728 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z6K0,Q96PU5 | |||
|association_with_transcript=-158bp_to_NM_001144966_5end | |||
|cluster_id=chr18:55888551..55888595,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_24_at_NEDD4L_5end | |||
|id=chr18:55888551..55888595,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.20e-16!42;CL:0000860!3.50e-15!45;CL:0000147!9.04e-14!14;CL:0000710!2.45e-13!20;CL:0000148!1.20e-12!10;CL:0000541!1.20e-12!10;CL:0000075!7.76e-11!27;CL:0002194!1.96e-10!63;CL:0000576!1.96e-10!63;CL:0000040!1.96e-10!63;CL:0000559!1.96e-10!63;CL:0002009!5.84e-10!65;CL:0000839!6.75e-09!70;CL:0002567!6.97e-09!3;CL:0000557!1.05e-08!71;CL:0000766!8.14e-08!76;CL:0002077!4.63e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.52e-46;10!CL:0000147;6.17e-33;14!CL:0002567;3.52e-29;3!CL:0000710;7.09e-23;20!CL:0000075;8.91e-17;27!CL:0000860;1.87e-15;33!CL:0002057;1.87e-15;33!CL:0000473;2.20e-13;39!CL:0000234;2.20e-13;39!CL:0002077;9.50e-12;34!CL:0002566;2.79e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.47e-46,10;CL:0000541,1.47e-46,10;CL:0000147,4.22e-33,14;CL:0002567,2.64e-29,3;CL:0000710,5.45e-23,20;CL:0000075,7.35e-17,27;CL:0000473,8.95e-15,48;CL:0000234,8.95e-15,48;CL:0000860,1.89e-13,42;CL:0002057,1.89e-13,42;CL:0000333,2.30e-13,41;CL:0002077,3.02e-13,34;CL:0002194,1.41e-11,59;CL:0000576,1.41e-11,59;CL:0000040,1.41e-11,59;CL:0000559,1.41e-11,59;CL:0002566,2.79e-11,1;CL:0002009,3.65e-11,61;CL:0000839,3.07e-10,66;CL:0000557,4.52e-10,67;CL:0000766,2.69e-09,72;CL:0000133,3.96e-09,59;CL:0000221,2.39e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.47e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!1.79e-08!101;UBERON:0001434!1.79e-08!101;UBERON:0002405!3.74e-08!115;UBERON:0001474!4.32e-08!86;UBERON:0002371!4.35e-08!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.47e-09,76;UBERON:0001474,4.99e-08,82;UBERON:0004765,3.26e-07,90;UBERON:0002405,6.06e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0.822335776043652,0.619412741790207,0,0,0,1.03423704220986,0.645484683583826,0,0,0,0.224723484445085,0.918251677112708,0.320929027076094,1.27867425159808,0,0,0,1.16083695451434,1.70215567407342,3.11411124497787,0.251248665256743,0.521482918420201,0,1.21079900526674,1.84138817993782,3.16462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0.577465791044295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58781469771088,5.72982638337417,1.17217447210047,1.71072446022705,2.26220483947312,5.40617504119051,1.71495859578347,0,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0,0.117141414992713,0.601892199455438,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0.451199612907412,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.320635281006135,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,1.51649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0.157115589916002,0,0,0,0,2.07281978112303,0,0,0,0,0,0,0,0,0.709992004383392,1.27820107138737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p24@NEDD4L | |||
}} |
Latest revision as of 23:26, 19 September 2015
Short description: | p24@NEDD4L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_NEDD4L_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -158bp_to_NM_001144966_5end |
EntrezGene: | NEDD4L |
HGNC: | 7728 |
UniProt: | B7Z6K0Q96PU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.47e-46 | 10 |
melanoblast | 1.47e-46 | 10 |
pigment cell | 4.22e-33 | 14 |
light melanocyte | 2.64e-29 | 3 |
neurecto-epithelial cell | 5.45e-23 | 20 |
columnar/cuboidal epithelial cell | 7.35e-17 | 27 |
defensive cell | 8.95e-15 | 48 |
phagocyte | 8.95e-15 | 48 |
classical monocyte | 1.89e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.89e-13 | 42 |
migratory neural crest cell | 2.30e-13 | 41 |
ecto-epithelial cell | 3.02e-13 | 34 |
monopoietic cell | 1.41e-11 | 59 |
monocyte | 1.41e-11 | 59 |
monoblast | 1.41e-11 | 59 |
promonocyte | 1.41e-11 | 59 |
dark melanocyte | 2.79e-11 | 1 |
macrophage dendritic cell progenitor | 3.65e-11 | 61 |
myeloid lineage restricted progenitor cell | 3.07e-10 | 66 |
granulocyte monocyte progenitor cell | 4.52e-10 | 67 |
myeloid leukocyte | 2.69e-09 | 72 |
neurectodermal cell | 3.96e-09 | 59 |
ectodermal cell | 2.39e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.47e-09 | 76 |
bone element | 4.99e-08 | 82 |
skeletal element | 3.26e-07 | 90 |
immune system | 6.06e-07 | 93 |