FFCP PHASE1:Hg19::chr1:204120920..204120929,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55224 | |EntrezGene=55224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25575 | |HGNC=25575 | ||
|TSSclassifier=strong | |||
|UniProt=B7ZC35 | |UniProt=B7ZC35 | ||
|association_with_transcript=-364bp_to_ENST00000429525_5end | |association_with_transcript=-364bp_to_ENST00000429525_5end | ||
|cluster_id=chr1:204120920..204120929,- | |||
|coexpression_cluster_id=C1469 | |coexpression_cluster_id=C1469 | ||
|description=CAGE_peak_12_at_ETNK2_5end | |description=CAGE_peak_12_at_ETNK2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002577;1.09e-21;3!CL:0000349;1.95e-17;19!CL:0002536;2.92e-15;2!CL:0002591;4.25e-08;1 | |ontology_enrichment_celltype_v019=CL:0002577;1.09e-21;3!CL:0000349;1.95e-17;19!CL:0002536;2.92e-15;2!CL:0002591;4.25e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002577,5.79e-22,3;CL:0000349,1.56e-17,19;CL:0002536,2.53e-15,2;CL:0002591,5.43e-08,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.66e-11!14;UBERON:0000158!4.66e-11!14;UBERON:0003135!1.30e-08!11;UBERON:0000062!2.67e-08!511;UBERON:0005156!1.34e-07!59;UBERON:0000990!1.34e-07!59;UBERON:0003101!1.40e-07!22;UBERON:0000079!1.40e-07!22;UBERON:0000473!4.87e-07!8;UBERON:0003133!5.95e-07!48 | |ontology_enrichment_uberon=UBERON:0005631!4.66e-11!14;UBERON:0000158!4.66e-11!14;UBERON:0003135!1.30e-08!11;UBERON:0000062!2.67e-08!511;UBERON:0005156!1.34e-07!59;UBERON:0000990!1.34e-07!59;UBERON:0003101!1.40e-07!22;UBERON:0000079!1.40e-07!22;UBERON:0000473!4.87e-07!8;UBERON:0003133!5.95e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.62e-16;7!UBERON:0001987;2.03e-16;4!UBERON:0000478;1.24e-13;24!UBERON:0005631;1.31e-11;10!UBERON:0000158;1.31e-11;10!UBERON:0002372;4.25e-08;1!UBERON:0001961;4.25e-08;1!UBERON:0001744;4.25e-08;1!UBERON:0001042;4.25e-08;1!UBERON:0001735;4.25e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0000305;1.62e-16;7!UBERON:0001987;2.03e-16;4!UBERON:0000478;1.24e-13;24!UBERON:0005631;1.31e-11;10!UBERON:0000158;1.31e-11;10!UBERON:0002372;4.25e-08;1!UBERON:0001961;4.25e-08;1!UBERON:0001744;4.25e-08;1!UBERON:0001042;4.25e-08;1!UBERON:0001735;4.25e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.43e-24,14;UBERON:0000158,4.43e-24,14;UBERON:0001987,1.27e-16,4;UBERON:0004340,1.27e-16,4;UBERON:0000305,1.63e-16,7;UBERON:0004871,1.79e-14,8;UBERON:0000478,1.04e-13,24;UBERON:0003124,1.02e-09,7;UBERON:0002372,4.11e-08,1;UBERON:0001961,4.11e-08,1;UBERON:0001744,4.11e-08,1;UBERON:0001735,4.11e-08,1 | |||
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| ||
|short_description=p12@ETNK2 | |short_description=p12@ETNK2 | ||
}} | }} |
Latest revision as of 00:23, 20 September 2015
Short description: | p12@ETNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ETNK2_5end |
Coexpression cluster: | C1469_kidney_amniotic_liver_Hepatocyte_Placental_Amniotic_tongue |
Association with transcript: | -364bp_to_ENST00000429525_5end |
EntrezGene: | ETNK2 |
HGNC: | 25575 |
UniProt: | B7ZC35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 5.79e-22 | 3 |
extraembryonic cell | 1.56e-17 | 19 |
amniotic epithelial cell | 2.53e-15 | 2 |
smooth muscle cell of the pulmonary artery | 5.43e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.43e-24 | 14 |
membranous layer | 4.43e-24 | 14 |
placenta | 1.27e-16 | 4 |
allantois | 1.27e-16 | 4 |
amnion | 1.63e-16 | 7 |
somatic layer of lateral plate mesoderm | 1.79e-14 | 8 |
extraembryonic structure | 1.04e-13 | 24 |
chorion | 1.02e-09 | 7 |
tonsil | 4.11e-08 | 1 |
mucosa-associated lymphoid tissue | 4.11e-08 | 1 |
lymphoid tissue | 4.11e-08 | 1 |
tonsillar ring | 4.11e-08 | 1 |