FFCP PHASE1:Hg19::chr9:110045537..110045572,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5887 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9813 | |||
|TSSclassifier=strong | |||
|UniProt=P54727 | |||
|association_with_transcript=0bp_to_ENST00000358015,uc004bde.2,uc011lwa.1_5end | |||
|cluster_id=chr9:110045537..110045572,+ | |||
|description=CAGE_peak_1_at_RAD23B_5end | |||
|id=chr9:110045537..110045572,+ | |||
|ontology_enrichment_celltype=CL:0000548!3.90e-08!679;CL:0000004!3.90e-08!679;CL:0000255!3.90e-08!679;CL:0000057!8.35e-08!75;CL:0000012!2.39e-07!682;CL:0000066!3.36e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.27e-08,76;CL:0000066,4.83e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!7.54e-11!95;UBERON:0004119!1.47e-08!169;UBERON:0000925!1.47e-08!169;UBERON:0006595!1.47e-08!169;UBERON:0002100!3.12e-08!216;UBERON:0001007!7.73e-08!155;UBERON:0001555!7.73e-08!155;UBERON:0007026!7.73e-08!155;UBERON:0000466!7.21e-07!126 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,8.70e-11,99;UBERON:0002100,3.54e-08,199;UBERON:0004119,3.61e-07,160;UBERON:0000925,3.61e-07,160;UBERON:0006595,3.61e-07,160 | |||
|phase1_expression=162.965506205689,201.896794029197,181.267363667419,186.136334936823,147.050200066578,163.127304006769,134.248935429205,151.612769622439,152.532406868706,176.682700344585,78.1537308129119,185.019842194256,174.613739587236,137.751950844532,139.186897805725,187.578715860045,194.670332551745,187.689693229555,127.350460484322,116.841884114872,109.752371889408,101.872784480379,101.900011418656,134.000062146354,115.248143148029,253.692507083198,249.996294875085,258.171362708868,124.696475761103,120.906260400622,192.436441281882,104.814019590598,122.28960302397,174.523892798724,128.130749759819,129.800509261016,70.4641054403633,116.339035791694,149.806702260196,110.024511452937,115.540384707801,115.630038768776,123.378696896775,150.487177136849,174.200810040541,169.808842831471,164.094900055413,178.446863401472,145.252287949804,140.681579845532,145.755442015058,120.842419473067,149.964371120429,162.662140263124,150.323400119719,157.370595857618,168.928906885807,107.867272533641,139.574254921132,156.613365213134,155.358921569167,170.203270896346,153.587016368657,161.965405202424,153.81089647315,230.358401224603,188.092319196664,142.70924186583,141.321870891875,97.3006024278923,154.376873171509,164.988380922429,145.256235835366,84.7133698110887,103.325689783011,98.1202460979199,139.73681714624,123.895936594243,160.404135523686,84.3637721474096,77.7764207848442,81.2855484252621,72.1584602291423,72.0902966866013,77.3873050861293,86.626235181001,86.4855331997787,60.3490061952207,64.1213526601316,62.967547799334,95.0585658412779,87.4983412162699,112.006055840692,81.946223718996,66.1400104318213,86.1265957214502,113.108117815454,92.7505400088029,94.1654865417752,83.4260611999484,59.643774793947,55.8668410766985,66.2410876586898,76.3161629663439,67.1701469042629,76.8722614205165,73.1170432165542,73.3963262028119,66.5903859506577,76.7925014499168,76.54895492668,92.7369874352168,68.2118190545478,65.8150437100694,59.5852485688368,97.2194160345118,73.195114277967,74.2235282242481,70.5924940734413,56.067512921041,53.3888432162263,46.5721501779703,65.0484514415978,61.8175331875841,58.7174414796025,60.8517537753123,60.7634717721574,81.8523377492414,88.7901450001244,78.7844757122427,168.226737756634,179.077129540871,210.461776794451,149.274369934826,222.092694411699,212.924382872411,170.191192668935,128.471605759896,114.198059134194,110.199510538894,126.482091398102,109.171059427343,134.424961379948,188.729281377275,171.685571243327,169.776493866786,135.218245847686,61.0535998221675,56.0555012564525,59.80465771406,141.121309230361,112.690731958902,183.29018484881,145.28414107447,123.332834245712,136.733666844214,108.468387632605,99.7488690393609,120.960529313481,159.327011675983,106.749769033924,120.122992703525,101.041691824942,144.123927495581,136.103847244136,128.591608729075,128.206271769543,149.660657562335,68.9924868596475,114.861144807744,98.1961347466983,295.188135056782,356.757843016459,204.092016402706,220.655546552721,159.174553162377,158.36138025261,91.5008820188716,159.246103607062,198.479870450377,157.988513679963,117.167085498151,234.030698620624,134.171829381409,131.259908200107,195.856511372541,174.00512919296,258.456539312678,171.063722103016,151.175032709279,159.910088190427,172.981016502266,163.006054978708,160.394821253968,170.264578826581,132.783897014021,199.935386575106,225.72054288359,313.53446632521,344.040994812574,158.814609341389,125.242068781825,190.805742804745,236.612754623492,285.335453572545,219.138773996299,242.934941251967,137.820102539426,130.954434052869,287.66180273861,320.441034553258,124.237713778943,305.550749191971,200.959621235591,257.027378593926,127.257354509915,215.725529426894,194.374006167968,387.161873689511,233.740198160002,167.919537260359,189.212440471508,184.14280324919,194.227157429113,180.557931831133,260.418572613215,227.602935637825,241.336708113425,233.201243339123,228.15798208883,231.882861954703,167.524607815806,175.223476209394,235.426183378596,158.855159555353,298.588577724563,212.954447092528,143.151228048211,169.59619821857,161.477390021933,145.036574143098,151.426213644222,147.582325087102,153.707691302587,163.844923379664,161.593805917484,114.41409546682,143.046609279515,219.780522050968,139.658275816265,338.435942974288,331.21277202036,307.21075147433,98.8877342688817,217.197582467139,141.715011306582,254.181661006377,151.742366897786,225.989129981346,195.269030839339,145.962120779025,108.153217669076,141.444715184768,133.319965721338,203.586675804915,115.060058865576,137.506697235253,138.885531131257,184.117624724511,177.706635553639,125.324456098485,117.938149630176,139.267399064538,149.036796038975,154.375575814752,142.625747825841,223.896306757121,208.675167853025,163.704404003545,127.599778615049,169.49323547546,274.917081207064,268.92783307605,261.321837192606,124.328877024067,158.525196606685,92.6017832959371,162.51882372157,157.531718821492,124.342025947382,159.491149407863,218.879876642144,197.053951112643,166.624585385198,140.776898460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| |||
|short_description=p1@RAD23B | |||
}} |
Latest revision as of 00:43, 20 September 2015
Short description: | p1@RAD23B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAD23B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000358015, uc004bde.2, uc011lwa.1_5end |
EntrezGene: | RAD23B |
HGNC: | 9813 |
UniProt: | P54727 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.27e-08 | 76 |
epithelial cell | 4.83e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
surface structure | 8.70e-11 | 99 |
trunk | 3.54e-08 | 199 |
endoderm-derived structure | 3.61e-07 | 160 |
endoderm | 3.61e-07 | 160 |
presumptive endoderm | 3.61e-07 | 160 |