FFCP PHASE1:Hg19::chr11:71952309..71952319,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401 | |EntrezGene=401 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=691 | |HGNC=691 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-73bp_to_ENST00000546310_5end | |association_with_transcript=-73bp_to_ENST00000546310_5end | ||
|cluster_id=chr11:71952309..71952319,- | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_2_at_PHOX2A_5end | |description=CAGE_peak_2_at_PHOX2A_5end | ||
|id=chr11:71952309..71952319,- | |id=chr11:71952309..71952319,- | ||
|ontology_enrichment_celltype=CL:0002322!1.93e-18!5;CL:0000133!2.87e-09!59;CL:0000333!1.18e-08!41;CL:0000221!9.21e-08!71 | |ontology_enrichment_celltype=CL:0002322!1.93e-18!5;CL:0000133!2.87e-09!59;CL:0000333!1.18e-08!41;CL:0000221!9.21e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000333;7.76e-118;5!CL:0002321;2.90e-40;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,7.46e-15,41;CL:0000133,8.52e-11,59;CL:0000221,4.40e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000221;6.77e-10;72!CL:0000133;1.64e-07;59 | |||
|ontology_enrichment_disease=DOID:169!5.37e-34!6;DOID:171!9.82e-21!10;DOID:3095!8.34e-10!22;DOID:2994!8.34e-10!22 | |ontology_enrichment_disease=DOID:169!5.37e-34!6;DOID:171!9.82e-21!10;DOID:3095!8.34e-10!22;DOID:2994!8.34e-10!22 | ||
|ontology_enrichment_disease_v019=DOID:169;1.83e-98;6!DOID:171;1.10e-59;10!DOID:3095;7.08e-28;22!DOID:2994;7.08e-28;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.83e-98,6;DOID:171,1.10e-59,10;DOID:3095,7.08e-28,22;DOID:2994,7.08e-28,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.30e-40!5;UBERON:0002410!1.30e-40!5;UBERON:0000010!5.99e-23!8;UBERON:0002298!7.27e-12!8;UBERON:0001896!1.30e-08!3;UBERON:0005290!1.30e-08!3;UBERON:0010096!1.30e-08!3;UBERON:0000988!1.51e-08!3;UBERON:0004733!3.18e-08!12;UBERON:0002028!3.18e-08!12;UBERON:0007277!3.18e-08!12;UBERON:0000073!3.38e-08!94;UBERON:0001016!3.38e-08!94;UBERON:0004732!1.16e-07!13;UBERON:0003076!9.36e-07!15;UBERON:0003057!9.36e-07!15 | |ontology_enrichment_uberon=UBERON:0000013!1.30e-40!5;UBERON:0002410!1.30e-40!5;UBERON:0000010!5.99e-23!8;UBERON:0002298!7.27e-12!8;UBERON:0001896!1.30e-08!3;UBERON:0005290!1.30e-08!3;UBERON:0010096!1.30e-08!3;UBERON:0000988!1.51e-08!3;UBERON:0004733!3.18e-08!12;UBERON:0002028!3.18e-08!12;UBERON:0007277!3.18e-08!12;UBERON:0000073!3.38e-08!94;UBERON:0001016!3.38e-08!94;UBERON:0004732!1.16e-07!13;UBERON:0003076!9.36e-07!15;UBERON:0003057!9.36e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;7.76e-118;5!UBERON:0002410;7.76e-118;5!UBERON:0000010;3.75e-66;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,7.76e-118,5;UBERON:0002410,7.76e-118,5;UBERON:0000010,3.75e-66,8;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p2@PHOX2A | |short_description=p2@PHOX2A | ||
}} | }} |
Latest revision as of 00:56, 20 September 2015
Short description: | p2@PHOX2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PHOX2A_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | -73bp_to_ENST00000546310_5end |
EntrezGene: | PHOX2A |
HGNC: | 691 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 7.46e-15 | 41 |
neurectodermal cell | 8.52e-11 | 59 |
ectodermal cell | 4.40e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 7.76e-118 | 5 |
autonomic nervous system | 7.76e-118 | 5 |
peripheral nervous system | 3.75e-66 | 8 |
nervous system | 1.68e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.83e-98 | 6 |
neuroectodermal tumor | 1.10e-59 | 10 |
germ cell and embryonal cancer | 7.08e-28 | 22 |
germ cell cancer | 7.08e-28 | 22 |