FFCP PHASE1:Hg19::chr4:100065410..100065414,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=127 | |EntrezGene=127 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=252 | |HGNC=252 | ||
|TSSclassifier=strong | |||
|UniProt=D6RIB1 | |UniProt=D6RIB1 | ||
|association_with_transcript=4bp_to_ENST00000504125_5end | |||
|cluster_id=chr4:100065410..100065414,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_ADH4_5end | |||
|id=chr4:100065410..100065414,- | |||
|ontology_enrichment_celltype=CL:0000181!2.74e-19!12;CL:0000417!2.74e-19!12;CL:0000668!2.74e-19!12;CL:0000414!2.74e-19!12;CL:0000412!2.74e-19!12;CL:0000182!2.74e-19!12;CL:0002336!3.96e-10!1;CL:0002261!3.96e-10!1;CL:0002170!3.96e-10!1;CL:0000223!5.64e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.06e-41;12!CL:0000047;3.70e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.23e-41,12;CL:0000223,3.29e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.89e-29;11!UBERON:0009497;1.18e-24;13!UBERON:0001041;6.27e-11;30!UBERON:0003104;1.71e-10;31!CL:0000223;8.04e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.09e-17!19;UBERON:0006925!3.09e-17!19;UBERON:0008836!3.09e-17!19;UBERON:0008835!7.89e-15!22;UBERON:0003894!7.89e-15!22;UBERON:0009854!3.63e-14!23;UBERON:0007499!5.36e-13!25;UBERON:0009497!5.36e-13!25;UBERON:0000015!5.36e-13!25;UBERON:0002423!5.36e-13!25;UBERON:0006235!5.36e-13!25;UBERON:0004161!5.36e-13!25;UBERON:0005057!1.76e-12!26;UBERON:0009856!1.76e-12!26;UBERON:0002365!2.15e-10!31;UBERON:0002330!2.15e-10!31;UBERON:0002363!4.75e-10!1;UBERON:0007647!4.75e-10!1;UBERON:0010115!4.75e-10!1;UBERON:0003929!5.47e-10!54;UBERON:0002368!3.76e-09!35;UBERON:0004921!3.70e-08!129;UBERON:0004185!3.70e-08!129;UBERON:0001007!1.05e-07!155;UBERON:0001555!1.05e-07!155;UBERON:0007026!1.05e-07!155;UBERON:0000949!5.22e-07!45;UBERON:0002530!5.70e-07!59;UBERON:0004119!6.83e-07!169;UBERON:0000925!6.83e-07!169;UBERON:0006595!6.83e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.80e-37;19!UBERON:0006925;2.80e-37;19!UBERON:0002423;2.28e-28;25!UBERON:0002365;3.00e-22;31!UBERON:0002330;3.00e-22;31!UBERON:0002368;2.59e-18;33!UBERON:0000949;5.12e-15;43!UBERON:0005172;7.72e-09;52!UBERON:0005173;7.72e-09;52!UBERON:0002530;3.79e-08;57!UBERON:0001007;4.55e-08;81!UBERON:0002417;4.78e-08;58!UBERON:0000916;4.78e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.80e-37,19;UBERON:0006925,2.80e-37,19;UBERON:0008836,2.80e-37,19;UBERON:0008835,3.23e-32,22;UBERON:0003894,3.23e-32,22;UBERON:0009854,8.01e-31,23;UBERON:0007499,2.29e-28,25;UBERON:0009497,2.29e-28,25;UBERON:0000015,2.29e-28,25;UBERON:0002423,2.29e-28,25;UBERON:0006235,2.29e-28,25;UBERON:0004161,2.29e-28,25;UBERON:0009856,2.79e-27,26;UBERON:0002365,6.77e-23,31;UBERON:0002330,6.77e-23,31;UBERON:0002368,2.76e-20,35;UBERON:0003929,9.95e-18,54;UBERON:0000949,8.80e-16,45;UBERON:0005172,3.80e-13,54;UBERON:0005173,3.80e-13,54;UBERON:0002530,5.00e-12,59;UBERON:0002417,7.95e-12,60;UBERON:0000916,7.95e-12,60;UBERON:0005911,1.32e-11,82;UBERON:0001041,4.04e-08,87;UBERON:0004921,6.60e-08,118;UBERON:0005177,5.70e-07,101 | |||
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|short_description=p4@ADH4 | |||
}} | }} |
Latest revision as of 00:57, 20 September 2015
Short description: | p4@ADH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ADH4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 4bp_to_ENST00000504125_5end |
EntrezGene: | ADH4 |
HGNC: | 252 |
UniProt: | D6RIB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.23e-41 | 12 |
endodermal cell | 3.29e-12 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.80e-37 | 19 |
digestive gland | 2.80e-37 | 19 |
liver bud | 2.80e-37 | 19 |
hepatic diverticulum | 3.23e-32 | 22 |
liver primordium | 3.23e-32 | 22 |
digestive tract diverticulum | 8.01e-31 | 23 |
epithelial sac | 2.29e-28 | 25 |
epithelium of foregut-midgut junction | 2.29e-28 | 25 |
anatomical boundary | 2.29e-28 | 25 |
hepatobiliary system | 2.29e-28 | 25 |
foregut-midgut junction | 2.29e-28 | 25 |
septum transversum | 2.29e-28 | 25 |
sac | 2.79e-27 | 26 |
exocrine gland | 6.77e-23 | 31 |
exocrine system | 6.77e-23 | 31 |
endocrine gland | 2.76e-20 | 35 |
gut epithelium | 9.95e-18 | 54 |
endocrine system | 8.80e-16 | 45 |
abdomen element | 3.80e-13 | 54 |
abdominal segment element | 3.80e-13 | 54 |
gland | 5.00e-12 | 59 |
abdominal segment of trunk | 7.95e-12 | 60 |
abdomen | 7.95e-12 | 60 |
endo-epithelium | 1.32e-11 | 82 |
foregut | 4.04e-08 | 87 |
subdivision of digestive tract | 6.60e-08 | 118 |
trunk region element | 5.70e-07 | 101 |